RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 KAT2AQ92830 837 aa1.79□□□□□ -2.12
RNU2-55P-201ENST00000411146 AIFM3Q96NN9 605 aa1.79□□□□□ -2.12
RNU2-55P-201ENST00000411146 NTPCRQ9BSD7 190 aaKnown RBP1.79□□□□□ -2.12
RNU2-55P-201ENST00000411146 TUBB6Q9BUF5 446 aa1.79□□□□□ -2.12
RNU2-55P-201ENST00000411146 MAGEH1Q9H213 219 aa1.79□□□□□ -2.12
RNU2-55P-201ENST00000411146 DHX36Q9H2U1 1008 aaKnown RBP1.79□□□□□ -2.12
RNU2-55P-201ENST00000411146 NMRK2Q9NPI5 230 aa1.79□□□□□ -2.12
RNU2-55P-201ENST00000411146 DNAJB11Q9UBS4 358 aa1.79□□□□□ -2.12
RNU2-55P-201ENST00000411146 AGO2Q9UKV8 859 aaKnown RBP1.79□□□□□ -2.12
RNU2-55P-201ENST00000411146 SPATA31A1Q5TZJ5 1347 aa1.79□□□□□ -2.12
RNU2-55P-201ENST00000411146 CAPN8A6NHC0 703 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 I6L893 689 aaPredicted RBP1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 FOXN3O00409 490 aaPredicted RBP1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 MAP4K4O95819 1239 aaPredicted RBP1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 RFPL3SP0C7P2 107 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 ARP10275 920 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 FGF3P11487 239 aaPredicted RBP1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 RHCEP18577 417 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 NDUFS1P28331 727 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 RBL1P28749 1068 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 ATICP31939 592 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 MLH1P40692 756 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 COMPP49747 757 aaPredicted RBP1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 PMS2P54278 862 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 ABATP80404 500 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 GAD2Q05329 585 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 PIN1Q13526 163 aaPredicted RBP1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 CNGA3Q16281 694 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 TMEM196Q5HYL7 178 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 GFI1BQ5VTD9 330 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 FAM90A2PQ658T7 463 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 DHRS13Q6UX07 377 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 GSG1LQ6UXU4 331 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 ARMC9Q7Z3E5 817 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 ARHGAP30Q7Z6I6 1101 aaPredicted RBP1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 DDX51Q8N8A6 666 aaKnown RBP eCLIP1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 PRR26Q8N8Z3 221 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 BCAS4Q8TDM0 211 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 ADAMTS14Q8WXS8 1223 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 AKAP1Q92667 903 aaKnown RBP eCLIP1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 VPS50Q96JG6 964 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 GPR78Q96P69 363 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 ZNF347Q96SE7 839 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 ELOVL1Q9BW60 279 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 RBM38Q9H0Z9 239 aaKnown RBP1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 TMEM60Q9H2L4 133 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 TMX1Q9H3N1 280 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 RMI1Q9H9A7 625 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 MAP6D1Q9H9H5 199 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 SPAG4Q9NPE6 437 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 PAPOLBQ9NRJ5 636 aaKnown RBP1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 SIRT3Q9NTG7 399 aaPredicted RBP1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 AFF4Q9UHB7 1163 aaKnown RBP1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 PNMA8BQ9ULN7 279 aaPredicted RBP1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 TPCN1Q9ULQ1 816 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 MAFFQ9ULX9 164 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 CAPN11Q9UMQ6 739 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 B3GNT3Q9Y2A9 372 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 THRAP3Q9Y2W1 955 aaKnown RBP1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 PTGDR2Q9Y5Y4 395 aa1.78□□□□□ -2.12
RNU2-55P-201ENST00000411146 RPS10-NUDT3A0A1W2PQS6 291 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 F8W810 466 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 SNX2O60749 519 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 ZC3H11AO75152 810 aaKnown RBP eCLIP1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 ZNF432O94892 652 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 MT-ND5P03915 603 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 MYF5P13349 255 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 VCAM1P19320 739 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 DRD1P21728 446 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 ITGB8P26012 769 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 CDC25AP30304 524 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 PCYT1AP49585 367 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 CARSP49589 748 aaKnown RBP1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 CLCN5P51795 746 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 RRP1P56182 461 aaKnown RBP1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 DMWDQ09019 674 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 BFSP2Q13515 415 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 GALEQ14376 348 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 ST3GAL2Q16842 350 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 C6orf10Q5SRN2 563 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 ZNF474Q6S9Z5 364 aaPredicted RBP1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 C16orf89Q6UX73 402 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 RTL10Q7L3V2 364 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 KRT28Q7Z3Y7 464 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 EXD3Q8N9H8 876 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 FAM156AQ8NDB6 213 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 ATP2A3Q93084 1043 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 MCRS1Q96EZ8 462 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 ZDHHC12Q96GR4 267 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 FAM227BQ96M60 508 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 MEIS3Q99687 375 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 CINPQ9BW66 212 aaPredicted RBP1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 TTLL2Q9BWV7 592 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 APOL5Q9BWW9 433 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 ISCUQ9H1K1 167 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 FZD3Q9NPG1 666 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 ZIM2Q9NZV7 527 aa1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 ERRFI1Q9UJM3 462 aaPredicted RBP1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 G3BP2Q9UN86 482 aaKnown RBP1.77□□□□□ -2.13
RNU2-55P-201ENST00000411146 MAGED2Q9UNF1 606 aaPredicted RBP1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms