RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 LAYNQ6UX15 382 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 LARP4Q71RC2 724 aaKnown RBP eCLIP5.3□□□□□ -1.564e-10■□□□□ 10.7
LSM5-205ENST00000409952 THNSL1Q8IYQ7 743 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 SPARTQ8N0X7 666 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 CNTROBQ8N137 903 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 SCML4Q8N228 414 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 FRMD1Q8N878 549 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 ZNF366Q8N895 744 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 DNAJB14Q8TBM8 379 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 SLC2A12Q8TD20 617 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 PPP2R3CQ969Q6 453 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 ELP4Q96EB1 424 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 KIF1BPQ96EK5 621 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 SAAL1Q96ER3 474 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 ZNF764Q96H86 408 aaPredicted RBP5.3□□□□□ -1.56
LSM5-205ENST00000409952 ENKD1Q9H0I2 346 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 SERHL2Q9H4I8 314 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 CCDC134Q9H6E4 229 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 SYNPO2LQ9H987 977 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 ETAA1Q9NY74 926 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 KCND2Q9NZV8 630 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 PPP4R1LQ9P1A2 415 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 LIMA1Q9UHB6 759 aaKnown RBP5.3□□□□□ -1.56
LSM5-205ENST00000409952 FAM184BQ9ULE4 1060 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 ZBTB1Q9Y2K1 713 aa5.3□□□□□ -1.56
LSM5-205ENST00000409952 PNPLA7Q6ZV29 1317 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 GOLGA6L10A0A0M3HER8 536 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 GXYLT2A0PJZ3 443 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 SH2D7A6NKC9 451 aaPredicted RBP5.29□□□□□ -1.56
LSM5-205ENST00000409952 B5MCH6 92 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 TGFB1I1O43294 461 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 LAMTOR5O43504 91 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 TBX10O75333 385 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 METTL18O95568 372 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 ALADP13716 330 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 STMN1P16949 149 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 KCNA3P22001 575 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 RBL1P28749 1068 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 ZNF41P51814 821 aaPredicted RBP5.29□□□□□ -1.56
LSM5-205ENST00000409952 PRKAG1P54619 331 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 CDH15P55291 814 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 LOXL3P58215 753 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 LILRA4P59901 499 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 RPL7AP62424 266 aaKnown RBP5.29□□□□□ -1.56
LSM5-205ENST00000409952 PPP2CBP62714 309 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 PPP2CAP67775 309 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 UBXN2AP68543 259 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 NEXNQ0ZGT2 675 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 AIMP2Q13155 320 aaKnown RBP5.29□□□□□ -1.56
LSM5-205ENST00000409952 MRPL49Q13405 166 aaKnown RBP5.29□□□□□ -1.56
LSM5-205ENST00000409952 UBXN2BQ14CS0 331 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 TCP11X2Q5H9J9 407 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 GARNL3Q5VVW2 1013 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 NCEH1Q6PIU2 408 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 ERC1Q8IUD2 1116 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 EPHX4Q8IUS5 362 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 ADGRF2Q8IZF7 708 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 FITM2Q8N6M3 262 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 TTC9BQ8N6N2 239 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 PTGR2Q8N8N7 351 aaPredicted RBP5.29□□□□□ -1.56
LSM5-205ENST00000409952 TBC1D15Q8TC07 691 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 NCSTNQ92542 709 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 ZNF653Q96CK0 615 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 MCRS1Q96EZ8 462 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 PERPQ96FX8 193 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 HIST1H2AAQ96QV6 131 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 PIGSQ96S52 555 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 PAAF1Q9BRP4 392 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 HGH1Q9BTY7 390 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 HERC2P3Q9BVR0 1158 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 KRTAP3-1Q9BYR8 98 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 MEGF9Q9H1U4 602 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 SLC6A15Q9H2J7 730 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 NDST4Q9H3R1 872 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 MROH8Q9H579 483 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 SLC35C2Q9NQQ7 365 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 TAB2Q9NYJ8 693 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 MRPL15Q9P015 296 aaKnown RBP5.29□□□□□ -1.56
LSM5-205ENST00000409952 HCN3Q9P1Z3 774 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 KNSTRNQ9Y448 316 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 KCNE2Q9Y6J6 123 aa5.29□□□□□ -1.56
LSM5-205ENST00000409952 A8MXE2 369 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 MYO1GB0I1T2 1018 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 POLRMTO00411 1230 aaKnown RBP5.28□□□□□ -1.56
LSM5-205ENST00000409952 SEC14L2O76054 403 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 HEXIM1O94992 359 aaKnown RBP5.28□□□□□ -1.56
LSM5-205ENST00000409952 GOSR1O95249 250 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 LMNAP02545 664 aaKnown RBP5.28□□□□□ -1.56
LSM5-205ENST00000409952 HGFP14210 728 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 IFNAR1P17181 557 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 CDH2P19022 906 aaPredicted RBP5.28□□□□□ -1.56
LSM5-205ENST00000409952 HK1P19367 917 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 ATP5F1P24539 256 aaPredicted RBP5.28□□□□□ -1.56
LSM5-205ENST00000409952 NTSR1P30989 418 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 THPOP40225 353 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 PXNP49023 591 aaPredicted RBP5.28□□□□□ -1.56
LSM5-205ENST00000409952 TOB1P50616 345 aaPredicted RBP5.28□□□□□ -1.56
LSM5-205ENST00000409952 CLCN2P51788 898 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 PGDP52209 483 aa5.28□□□□□ -1.56
LSM5-205ENST00000409952 PSMC6P62333 389 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms