RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 SELENOSQ9BQE4 189 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ABHD16BQ9H3Z7 469 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ITM2CQ9NQX7 267 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 DUS2Q9NX74 493 aaKnown RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 NINJ2Q9NZG7 142 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 EBF1Q9UH73 591 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 NOCTQ9UK39 431 aaKnown RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 KMT2AQ03164 3969 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 PCNX2A6NKB5 2137 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 SSU72P8A0A1W2PR75 194 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 HMGB1P1B2RPK0 211 aaPredicted RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 PPP6CO00743 305 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 TRAFD1O14545 582 aaPredicted RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 MEIS2O14770 477 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ERLIN1O75477 346 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 DEXIO95424 95 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 NPTXRO95502 500 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 BMPR1AP36894 532 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 KCNC3Q14003 757 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 DUSP6Q16828 381 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 CAVIN4Q5BKX8 364 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 SPOPLQ6IQ16 392 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 PMF1Q6P1K2 205 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 C16orf46Q6P387 395 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 PGM2L1Q6PCE3 622 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ZC3H18Q86VM9 953 aaKnown RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ADGRF2Q8IZF7 708 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 PQLC3Q8N755 202 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 TFB1MQ8WVM0 346 aaKnown RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 IRGQQ8WZA9 623 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 PRICKLE1Q96MT3 831 aaPredicted RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 PIGSQ96S52 555 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 BTBD2Q9BX70 525 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 OLAHQ9NV23 265 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 TUBGCP4Q9UGJ1 667 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ARMCX3Q9UH62 379 aaPredicted RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 DNPEPQ9ULA0 475 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 TMEM98Q9Y2Y6 226 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 PMF1-BGLAPU3KQ54 211 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 ANKRD17O75179 2603 aaKnown RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 SCN3AQ9NY46 2000 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 A0A1W2PPW3 197 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 DLATP10515 647 aaKnown RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 GLULP15104 373 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 SELPP16109 830 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 TFE3P19532 575 aaPredicted RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 YAP1P46937 504 aaKnown RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 CXCR3P49682 368 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 GSTO1P78417 241 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 MECOMQ03112 1051 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 IKBKEQ14164 716 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 PRR23CQ6ZRP0 262 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 CCDC121Q6ZUS5 278 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 CYP4V2Q6ZWL3 525 aaPredicted RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 CATSPER3Q86XQ3 398 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 C1orf210Q8IVY1 113 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 RAD54LQ92698 747 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 PGBD4Q96DM1 585 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 DDX27Q96GQ7 796 aaKnown RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 RSRC1Q96IZ7 334 aaKnown RBP3.25□□□□□ -1.89
RGPD3-202ENST00000409886 HAPLN2Q9GZV7 340 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 CDH19Q9H159 772 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 SLC2A4RGQ9NR83 387 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 APPL1Q9UKG1 709 aa3.25□□□□□ -1.89
RGPD3-202ENST00000409886 VWA8A3KMH1 1905 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 A0A0X1KG70 313 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 P4HA2O15460 535 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 ASLP04424 464 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 HMGB1P09429 215 aaKnown RBP3.24□□□□□ -1.89
RGPD3-202ENST00000409886 FERP16591 822 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 ZNF26P17031 533 aaPredicted RBP3.24□□□□□ -1.89
RGPD3-202ENST00000409886 ENPP1P22413 925 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 CES1P23141 567 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 IL1R2P27930 398 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 RPS9P46781 194 aaKnown RBP3.24□□□□□ -1.89
RGPD3-202ENST00000409886 BMXP51813 675 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 OXCT1P55809 520 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 NAA20P61599 178 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 CRADDP78560 199 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 PITRM1Q5JRX3 1037 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 KCNT1Q5JUK3 1230 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 SLC2A7Q6PXP3 512 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 IZUMO2Q6UXV1 221 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 C10orf111Q8N326 155 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 TDRD5Q8NAT2 981 aaKnown RBP3.24□□□□□ -1.89
RGPD3-202ENST00000409886 CCDC197Q8NCU1 140 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.24□□□□□ -1.89
RGPD3-202ENST00000409886 MKL1Q969V6 931 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 SKA1Q96BD8 255 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 KLHL5Q96PQ7 755 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 LSM14BQ9BX40 385 aaKnown RBP3.24□□□□□ -1.89
RGPD3-202ENST00000409886 MIS12Q9H081 205 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 NUCKS1Q9H1E3 243 aaKnown RBP3.24□□□□□ -1.89
RGPD3-202ENST00000409886 NOP53Q9NZM5 478 aaKnown RBP3.24□□□□□ -1.89
RGPD3-202ENST00000409886 SLCO3A1Q9UIG8 710 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 ZNF180Q9UJW8 692 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 ACACAQ13085 2346 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 PI15O43692 258 aa3.24□□□□□ -1.89
RGPD3-202ENST00000409886 TTC4O95801 387 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms