RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 FBXO21O94952 628 aa15.38■□□□□ 0.05
CBX3-203ENST00000409747 FGFR1OPO95684 399 aaKnown RBP15.38■□□□□ 0.05
CBX3-203ENST00000409747 SERPINF2P08697 491 aa15.38■□□□□ 0.05
CBX3-203ENST00000409747 IL12RB1P42701 662 aa15.38■□□□□ 0.05
CBX3-203ENST00000409747 MAPK8P45983 427 aa15.38■□□□□ 0.05
CBX3-203ENST00000409747 MARSP56192 900 aaKnown RBP15.38■□□□□ 0.05
CBX3-203ENST00000409747 UAP1L1Q3KQV9 507 aa15.38■□□□□ 0.05
CBX3-203ENST00000409747 ADGRF1Q5T601 910 aa15.38■□□□□ 0.05
CBX3-203ENST00000409747 NUGGCQ68CJ6 796 aa15.38■□□□□ 0.05
CBX3-203ENST00000409747 MSANTD2Q6P1R3 559 aa15.38■□□□□ 0.05
CBX3-203ENST00000409747 UNC45BQ8IWX7 931 aa15.38■□□□□ 0.05
CBX3-203ENST00000409747 RBBP8NLQ8NC74 664 aaPredicted RBP15.38■□□□□ 0.05
CBX3-203ENST00000409747 WFIKKN2Q8TEU8 576 aa15.38■□□□□ 0.05
CBX3-203ENST00000409747 TFAP2BQ92481 460 aa15.38■□□□□ 0.05
CBX3-203ENST00000409747 ERLEC1Q96DZ1 483 aa15.38■□□□□ 0.05
CBX3-203ENST00000409747 HSPA12BQ96MM6 686 aa15.38■□□□□ 0.05
CBX3-203ENST00000409747 SFMBT1Q9UHJ3 866 aa15.38■□□□□ 0.05
CBX3-203ENST00000409747 AFPP02771 609 aaKnown RBP15.37■□□□□ 0.05
CBX3-203ENST00000409747 BMP6P22004 513 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 BRD2P25440 801 aaKnown RBP15.37■□□□□ 0.05
CBX3-203ENST00000409747 HOXD9P28356 352 aaPredicted RBP15.37■□□□□ 0.05
CBX3-203ENST00000409747 CD6P30203 668 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 RGS7P49802 495 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 ZNF252P-AS1Q0IIN9 211 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 KCNH2Q12809 1159 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 ZNF234Q14588 700 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 WDR45BQ5MNZ6 344 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 PMF1Q6P1K2 205 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 SERPINA13PQ6UXR4 307 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 TRIM59Q8IWR1 403 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 HDDC3Q8N4P3 179 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 ZNF557Q8N988 423 aaPredicted RBP15.37■□□□□ 0.05
CBX3-203ENST00000409747 TRIML1Q8N9V2 468 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 LMO3Q8TAP4 145 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 SLC32A1Q9H598 525 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 USP36Q9P275 1121 aaKnown RBP15.37■□□□□ 0.05
CBX3-203ENST00000409747 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.37■□□□□ 0.05
CBX3-203ENST00000409747 TPRP12270 2363 aaKnown RBP15.37■□□□□ 0.05
CBX3-203ENST00000409747 IRAK2O43187 625 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 SART1O43290 800 aaKnown RBP15.37■□□□□ 0.05
CBX3-203ENST00000409747 LTFP02788 710 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 SYPP08247 313 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 GNSP15586 552 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 OXTRP30559 389 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 SLC11A2P49281 568 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 RING1Q06587 406 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 RRAGAQ7L523 313 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 SLC41A1Q8IVJ1 513 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 RGL4Q8IZJ4 473 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 DEFB119Q8N690 84 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 EHBP1Q8NDI1 1231 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 PRCCQ92733 491 aaPredicted RBP15.37■□□□□ 0.05
CBX3-203ENST00000409747 KAT5Q92993 513 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 TMA16Q96EY4 203 aaKnown RBP15.37■□□□□ 0.05
CBX3-203ENST00000409747 ZNF419Q96HQ0 510 aaPredicted RBP15.37■□□□□ 0.05
CBX3-203ENST00000409747 TRIM62Q9BVG3 475 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 SLC6A17Q9H1V8 727 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 CAPN10Q9HC96 672 aa15.37■□□□□ 0.05
CBX3-203ENST00000409747 EPG5Q9HCE0 2579 aa15.36■□□□□ 0.05
CBX3-203ENST00000409747 RNF225M0QZC1 329 aaPredicted RBP15.36■□□□□ 0.05
CBX3-203ENST00000409747 BIN1O00499 593 aa15.36■□□□□ 0.05
CBX3-203ENST00000409747 MSI1O43347 362 aaKnown RBP15.36■□□□□ 0.05
CBX3-203ENST00000409747 TSPAN3O60637 253 aa15.36■□□□□ 0.05
CBX3-203ENST00000409747 EPHX1P07099 455 aa15.36■□□□□ 0.05
CBX3-203ENST00000409747 ACADMP11310 421 aa15.36■□□□□ 0.05
CBX3-203ENST00000409747 NCAM1P13591 858 aa15.36■□□□□ 0.05
CBX3-203ENST00000409747 MEA1Q16626 185 aa15.36■□□□□ 0.05
CBX3-203ENST00000409747 MPP7Q5T2T1 576 aa15.36■□□□□ 0.05
CBX3-203ENST00000409747 TMPRSS6Q8IU80 811 aa15.36■□□□□ 0.05
CBX3-203ENST00000409747 AHI1Q8N157 1196 aa15.36■□□□□ 0.05
CBX3-203ENST00000409747 SIPA1Q96FS4 1042 aa15.36■□□□□ 0.05
CBX3-203ENST00000409747 DDX50Q9BQ39 737 aaKnown RBP15.36■□□□□ 0.05
CBX3-203ENST00000409747 GTPBP2Q9BX10 602 aaKnown RBP15.36■□□□□ 0.05
CBX3-203ENST00000409747 MKRN2Q9H000 416 aaKnown RBP15.36■□□□□ 0.05
CBX3-203ENST00000409747 CLEC4EQ9ULY5 219 aa15.36■□□□□ 0.05
CBX3-203ENST00000409747 PLA2G4CQ9UP65 541 aa15.36■□□□□ 0.05
CBX3-203ENST00000409747 NFE2L3Q9Y4A8 694 aa15.36■□□□□ 0.05
CBX3-203ENST00000409747 CKAP5Q14008 2032 aa15.35■□□□□ 0.05
CBX3-203ENST00000409747 CHD8Q9HCK8 2581 aa15.35■□□□□ 0.05
CBX3-203ENST00000409747 TYW5A2RUC4 315 aaKnown RBP15.35■□□□□ 0.05
CBX3-203ENST00000409747 MEI4A8MW99 385 aa15.35■□□□□ 0.05
CBX3-203ENST00000409747 UPK3BL1B0FP48 263 aa15.35■□□□□ 0.05
CBX3-203ENST00000409747 UPK3BL2E5RIL1 263 aa15.35■□□□□ 0.05
CBX3-203ENST00000409747 MED7O43513 233 aa15.35■□□□□ 0.05
CBX3-203ENST00000409747 IGLV3-27P01718 113 aa15.35■□□□□ 0.05
CBX3-203ENST00000409747 STX17P56962 302 aa15.35■□□□□ 0.05
CBX3-203ENST00000409747 ST3GAL2Q16842 350 aa15.35■□□□□ 0.05
CBX3-203ENST00000409747 ARHGEF19Q8IW93 802 aa15.35■□□□□ 0.05
CBX3-203ENST00000409747 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.35■□□□□ 0.05
CBX3-203ENST00000409747 CADM4Q8NFZ8 388 aa15.35■□□□□ 0.05
CBX3-203ENST00000409747 AZIN2Q96A70 460 aa15.35■□□□□ 0.05
CBX3-203ENST00000409747 TOE1Q96GM8 510 aaKnown RBP15.35■□□□□ 0.05
CBX3-203ENST00000409747 FAM81BQ96LP2 452 aa15.35■□□□□ 0.05
CBX3-203ENST00000409747 SERPINB11Q96P15 392 aa15.35■□□□□ 0.05
CBX3-203ENST00000409747 SRRTQ9BXP5 876 aaKnown RBP15.35■□□□□ 0.05
CBX3-203ENST00000409747 INTS2Q9H0H0 1204 aaKnown RBP15.35■□□□□ 0.05
CBX3-203ENST00000409747 ITM2CQ9NQX7 267 aa15.35■□□□□ 0.05
CBX3-203ENST00000409747 PI4KAP42356 2102 aa15.35■□□□□ 0.05
CBX3-203ENST00000409747 PIK3R2O00459 728 aa15.34■□□□□ 0.05
CBX3-203ENST00000409747 ARHGAP33O14559 1287 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms