RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 SND1Q7KZF4 910 aaKnown RBP eCLIP14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 STRADAQ7RTN6 431 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 OTOP3Q7RTS5 596 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 BBS7Q8IWZ6 715 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 LRRC57Q8N9N7 239 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 HSPH1Q92598 858 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 BHMTQ93088 406 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 PHF7Q9BWX1 381 aaPredicted RBP14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 ZFP14Q9HCL3 533 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 RRN3Q9NYV6 651 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 LIMD1Q9UGP4 676 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 USP18Q9UMW8 372 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 HBS1LQ9Y450 684 aaKnown RBP14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 WNT6Q9Y6F9 365 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 NUMBLQ9Y6R0 609 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 GREM1O60565 184 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 ENDOD1O94919 500 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 APOEP02649 317 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 CCR1P32246 355 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 HADHBP55084 474 aaKnown RBP14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 ZFYVE27Q5T4F4 411 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 NADSYN1Q6IA69 706 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 RFWD3Q6PCD5 774 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 NIPA2Q8N8Q9 360 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 MYEOVQ96EZ4 313 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 PGAP3Q96FM1 320 aaPredicted RBP14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 ASIC4Q96FT7 647 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 SNRNP25Q9BV90 132 aaKnown RBP14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 LINC00597Q9H2U6 94 aa14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 AGO1Q9UL18 857 aaKnown RBP14.64□□□□□ -0.07
CHRNA1-204ENST00000409323 PRPSAP2O60256 369 aa14.63□□□□□ -0.07
CHRNA1-204ENST00000409323 TSPAN3O60637 253 aa14.63□□□□□ -0.07
CHRNA1-204ENST00000409323 PAGE1O75459 146 aa14.63□□□□□ -0.07
CHRNA1-204ENST00000409323 F9P00740 461 aa14.63□□□□□ -0.07
CHRNA1-204ENST00000409323 DESP17661 470 aa14.63□□□□□ -0.07
CHRNA1-204ENST00000409323 HARS2P49590 506 aaKnown RBP14.63□□□□□ -0.07
CHRNA1-204ENST00000409323 SLC25A11Q02978 314 aaKnown RBP14.63□□□□□ -0.07
CHRNA1-204ENST00000409323 USP4Q13107 963 aa14.63□□□□□ -0.07
CHRNA1-204ENST00000409323 LLGL1Q15334 1064 aa14.63□□□□□ -0.07
CHRNA1-204ENST00000409323 ZNF569Q5MCW4 686 aa14.63□□□□□ -0.07
CHRNA1-204ENST00000409323 PIK3R6Q5UE93 754 aa14.63□□□□□ -0.07
CHRNA1-204ENST00000409323 RAP1GAP2Q684P5 730 aa14.63□□□□□ -0.07
CHRNA1-204ENST00000409323 ZNF662Q6ZS27 426 aa14.63□□□□□ -0.07
CHRNA1-204ENST00000409323 CELF5Q8N6W0 485 aaKnown RBP14.63□□□□□ -0.07
CHRNA1-204ENST00000409323 TTC8Q8TAM2 541 aa14.63□□□□□ -0.07
CHRNA1-204ENST00000409323 KRT35Q92764 455 aa14.63□□□□□ -0.07
CHRNA1-204ENST00000409323 PLD4Q96BZ4 506 aa14.63□□□□□ -0.07
CHRNA1-204ENST00000409323 KIF26AQ9ULI4 1882 aaPredicted RBP14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 KCNU1A8MYU2 1149 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 PI4K2BG5E9Z4 385 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 FAM72CH0Y354 149 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 PFKLP17858 780 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 SLC6A4P31645 630 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 ADRA1BP35368 520 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 SGSHP51688 502 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 FAM72AQ5TYM5 149 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 FAM72DQ6L9T8 149 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 C11orf63Q6NUN7 778 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 TPGS1Q6ZTW0 290 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 PEX26Q7Z412 305 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 SLFN11Q7Z7L1 901 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 C14orf80Q86SX3 495 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 FAM72BQ86X60 149 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 SLC35F6Q8N357 371 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 BPIFB1Q8TDL5 484 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 DHX35Q9H5Z1 703 aaKnown RBP14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 ARHGEF38Q9NXL2 777 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 EPS15L1Q9UBC2 864 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 LSM7Q9UK45 103 aaKnown RBP14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 FZD10Q9ULW2 581 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 AP4E1Q9UPM8 1137 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 HS3ST4Q9Y661 456 aa14.62□□□□□ -0.07
CHRNA1-204ENST00000409323 ENC1O14682 589 aa14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 SRGAP2O75044 1071 aa14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 RARAP10276 462 aa14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 ARSAP15289 507 aa14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 MAN1A1P33908 653 aa14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 NUMBP49757 651 aa14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 IRAK1P51617 712 aa14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 KPNA1P52294 538 aaPredicted RBP14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 RING1Q06587 406 aa14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 TNK2Q07912 1038 aa14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 NNTQ13423 1086 aa14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 HTR4Q13639 388 aa14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 PPP2R5DQ14738 602 aa14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 IFI16Q16666 785 aaKnown RBP14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 MS4A13Q5J8X5 152 aa14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 NUGGCQ68CJ6 796 aa14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 Q6ZNB5 142 aa14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 NT5DC3Q86UY8 548 aa14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 CHSY1Q86X52 802 aa14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 CIR1Q86X95 450 aaPredicted RBP14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 UNC45BQ8IWX7 931 aa14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 RNF10Q8N5U6 811 aaKnown RBP14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 ATP6V0D2Q8N8Y2 350 aa14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 P2RY11Q96G91 374 aa14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 PSMB7Q99436 277 aa14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.61□□□□□ -0.07
CHRNA1-204ENST00000409323 NR2E1Q9Y466 385 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms