RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 CYB5D2Q8WUJ1 264 aa17.49■□□□□ 0.39
CHMP3-203ENST00000409225 BAP1Q92560 729 aa17.49■□□□□ 0.39
CHMP3-203ENST00000409225 TENM4Q6N022 2769 aa17.49■□□□□ 0.39
CHMP3-203ENST00000409225 MAST4O15021 2626 aa17.49■□□□□ 0.39
CHMP3-203ENST00000409225 CFAP46Q8IYW2 2715 aa17.49■□□□□ 0.39
CHMP3-203ENST00000409225 A0A1B0GTQ1 180 aa17.48■□□□□ 0.39
CHMP3-203ENST00000409225 LRRIQ3A6PVS8 624 aaPredicted RBP17.48■□□□□ 0.39
CHMP3-203ENST00000409225 J3QKU1 62 aa17.48■□□□□ 0.39
CHMP3-203ENST00000409225 TIMM44O43615 452 aa17.48■□□□□ 0.39
CHMP3-203ENST00000409225 DFNA5O60443 496 aa17.48■□□□□ 0.39
CHMP3-203ENST00000409225 EXOC3O60645 756 aa17.48■□□□□ 0.39
CHMP3-203ENST00000409225 KIF20AO95235 890 aa17.48■□□□□ 0.39
CHMP3-203ENST00000409225 P4HA1P13674 534 aa17.48■□□□□ 0.39
CHMP3-203ENST00000409225 CFHR1Q03591 330 aa17.48■□□□□ 0.39
CHMP3-203ENST00000409225 HES3Q5TGS1 186 aa17.48■□□□□ 0.39
CHMP3-203ENST00000409225 GPR155Q7Z3F1 870 aa17.48■□□□□ 0.39
CHMP3-203ENST00000409225 ORAI3Q9BRQ5 295 aa17.48■□□□□ 0.39
CHMP3-203ENST00000409225 ACE2Q9BYF1 805 aaPredicted RBP17.48■□□□□ 0.39
CHMP3-203ENST00000409225 TNMDQ9H2S6 317 aa17.48■□□□□ 0.39
CHMP3-203ENST00000409225 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.48■□□□□ 0.39
CHMP3-203ENST00000409225 TEX51A0A1B0GUA7 166 aa17.47■□□□□ 0.39
CHMP3-203ENST00000409225 C4BPAP04003 597 aaKnown RBP17.47■□□□□ 0.39
CHMP3-203ENST00000409225 DNTTP04053 509 aa17.47■□□□□ 0.39
CHMP3-203ENST00000409225 ITGAVP06756 1048 aa17.47■□□□□ 0.39
CHMP3-203ENST00000409225 ABCB4P21439 1286 aa17.47■□□□□ 0.39
CHMP3-203ENST00000409225 PSEN1P49768 467 aa17.47■□□□□ 0.39
CHMP3-203ENST00000409225 KIF11P52732 1056 aa17.47■□□□□ 0.39
CHMP3-203ENST00000409225 RPS14P62263 151 aaKnown RBP17.47■□□□□ 0.39
CHMP3-203ENST00000409225 SNRPFP62306 86 aaKnown RBP17.47■□□□□ 0.39
CHMP3-203ENST00000409225 CCDC173Q0VFZ6 552 aa17.47■□□□□ 0.39
CHMP3-203ENST00000409225 CCDC186Q7Z3E2 898 aa17.47■□□□□ 0.39
CHMP3-203ENST00000409225 UNC93AQ86WB7 457 aa17.47■□□□□ 0.39
CHMP3-203ENST00000409225 SNIP1Q8TAD8 396 aaKnown RBP17.47■□□□□ 0.39
CHMP3-203ENST00000409225 SLC6A18Q96N87 628 aa17.47■□□□□ 0.39
CHMP3-203ENST00000409225 TWNKQ96RR1 684 aa17.47■□□□□ 0.39
CHMP3-203ENST00000409225 CDK5RAP1Q96SZ6 601 aaKnown RBP17.47■□□□□ 0.39
CHMP3-203ENST00000409225 HNRNPABQ99729 332 aaKnown RBP17.47■□□□□ 0.39
CHMP3-203ENST00000409225 SLC2A11Q9BYW1 496 aa17.47■□□□□ 0.39
CHMP3-203ENST00000409225 LRRC27Q9C0I9 530 aa17.47■□□□□ 0.39
CHMP3-203ENST00000409225 NRSN2Q9GZP1 204 aa17.47■□□□□ 0.39
CHMP3-203ENST00000409225 SGK2Q9HBY8 427 aa17.47■□□□□ 0.39
CHMP3-203ENST00000409225 UBE4BO95155 1302 aa17.47■□□□□ 0.39
CHMP3-203ENST00000409225 C1SP09871 688 aa17.46■□□□□ 0.39
CHMP3-203ENST00000409225 TRIM21P19474 475 aaKnown RBP17.46■□□□□ 0.39
CHMP3-203ENST00000409225 ACADVLP49748 655 aa17.46■□□□□ 0.39
CHMP3-203ENST00000409225 AP3M2P53677 418 aa17.46■□□□□ 0.39
CHMP3-203ENST00000409225 RACK1P63244 317 aaKnown RBP17.46■□□□□ 0.39
CHMP3-203ENST00000409225 CXADRP78310 365 aa17.46■□□□□ 0.39
CHMP3-203ENST00000409225 RTP5Q14D33 572 aa17.46■□□□□ 0.39
CHMP3-203ENST00000409225 SPOPLQ6IQ16 392 aa17.46■□□□□ 0.39
CHMP3-203ENST00000409225 PCSK4Q6UW60 755 aa17.46■□□□□ 0.39
CHMP3-203ENST00000409225 CPXM2Q8N436 756 aa17.46■□□□□ 0.39
CHMP3-203ENST00000409225 EID2Q8N6I1 236 aa17.46■□□□□ 0.39
CHMP3-203ENST00000409225 PARD3BQ8TEW8 1205 aa17.46■□□□□ 0.39
CHMP3-203ENST00000409225 CYFIP2Q96F07 1278 aa17.46■□□□□ 0.39
CHMP3-203ENST00000409225 ELF4Q99607 663 aaPredicted RBP17.46■□□□□ 0.39
CHMP3-203ENST00000409225 TMEM245Q9H330 911 aa17.46■□□□□ 0.39
CHMP3-203ENST00000409225 PNPLA8Q9NP80 782 aa17.46■□□□□ 0.39
CHMP3-203ENST00000409225 KBTBD4Q9NVX7 518 aa17.46■□□□□ 0.39
CHMP3-203ENST00000409225 CLIC5Q9NZA1 410 aa17.46■□□□□ 0.39
CHMP3-203ENST00000409225 PLA2G4CQ9UP65 541 aa17.46■□□□□ 0.39
CHMP3-203ENST00000409225 COL5A1P20908 1838 aaPredicted RBP17.46■□□□□ 0.39
CHMP3-203ENST00000409225 SLC12A8A0AV02 714 aa17.45■□□□□ 0.38
CHMP3-203ENST00000409225 FAM47DPA6NHR8 397 aa17.45■□□□□ 0.38
CHMP3-203ENST00000409225 VILLO15195 856 aa17.45■□□□□ 0.38
CHMP3-203ENST00000409225 STX6O43752 255 aa17.45■□□□□ 0.38
CHMP3-203ENST00000409225 IGHV4-34P06331 123 aa17.45■□□□□ 0.38
CHMP3-203ENST00000409225 CDK4P11802 303 aa17.45■□□□□ 0.38
CHMP3-203ENST00000409225 ASPAP45381 313 aa17.45■□□□□ 0.38
CHMP3-203ENST00000409225 ZBTB16Q05516 673 aa17.45■□□□□ 0.38
CHMP3-203ENST00000409225 SGSM1Q2NKQ1 1148 aa17.45■□□□□ 0.38
CHMP3-203ENST00000409225 TTC31Q49AM3 519 aaPredicted RBP17.45■□□□□ 0.38
CHMP3-203ENST00000409225 KIAA0895LQ68EN5 471 aa17.45■□□□□ 0.38
CHMP3-203ENST00000409225 CHST9Q7L1S5 443 aa17.45■□□□□ 0.38
CHMP3-203ENST00000409225 C12orf56Q8IXR9 622 aa17.45■□□□□ 0.38
CHMP3-203ENST00000409225 ZNF276Q8N554 614 aa17.45■□□□□ 0.38
CHMP3-203ENST00000409225 GANCQ8TET4 914 aa17.45■□□□□ 0.38
CHMP3-203ENST00000409225 FGF11Q92914 225 aa17.45■□□□□ 0.38
CHMP3-203ENST00000409225 PRSS16Q9NQE7 514 aa17.45■□□□□ 0.38
CHMP3-203ENST00000409225 MARCH2Q9P0N8 246 aa17.45■□□□□ 0.38
CHMP3-203ENST00000409225 TP53BP1Q12888 1972 aaPredicted RBP17.45■□□□□ 0.38
CHMP3-203ENST00000409225 PLXNA2O75051 1894 aa17.44■□□□□ 0.38
CHMP3-203ENST00000409225 BRINP1O60477 761 aa17.44■□□□□ 0.38
CHMP3-203ENST00000409225 WNT1P04628 370 aa17.44■□□□□ 0.38
CHMP3-203ENST00000409225 NEFLP07196 543 aa17.44■□□□□ 0.38
CHMP3-203ENST00000409225 HOXD9P28356 352 aaPredicted RBP17.44■□□□□ 0.38
CHMP3-203ENST00000409225 HLA-FP30511 346 aa17.44■□□□□ 0.38
CHMP3-203ENST00000409225 AMPD3Q01432 767 aa17.44■□□□□ 0.38
CHMP3-203ENST00000409225 TLE3Q04726 772 aa17.44■□□□□ 0.38
CHMP3-203ENST00000409225 SHBQ15464 509 aa17.44■□□□□ 0.38
CHMP3-203ENST00000409225 E2F4Q16254 413 aa17.44■□□□□ 0.38
CHMP3-203ENST00000409225 TAF1BQ53T94 588 aaPredicted RBP17.44■□□□□ 0.38
CHMP3-203ENST00000409225 ZNF776Q68DI1 518 aaPredicted RBP17.44■□□□□ 0.38
CHMP3-203ENST00000409225 FBXL19Q6PCT2 694 aa17.44■□□□□ 0.38
CHMP3-203ENST00000409225 RSRC2Q7L4I2 434 aaKnown RBP17.44■□□□□ 0.38
CHMP3-203ENST00000409225 SAP25Q8TEE9 199 aa17.44■□□□□ 0.38
CHMP3-203ENST00000409225 WFIKKN2Q8TEU8 576 aa17.44■□□□□ 0.38
CHMP3-203ENST00000409225 TMEM176AQ96HP8 235 aa17.44■□□□□ 0.38
CHMP3-203ENST00000409225 ARID3AQ99856 593 aa17.44■□□□□ 0.38
CHMP3-203ENST00000409225 FBRSQ9HAH7 460 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms