RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 MIS12Q9H081 205 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 POPDC2Q9HBU9 364 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 ELOVL2Q9NXB9 296 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 CALCOCO1Q9P1Z2 691 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 THAP10Q9P2Z0 257 aaPredicted RBP9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 SUSD2Q9UGT4 822 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 SFMBT1Q9UHJ3 866 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 SLC12A6Q9UHW9 1150 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 EVLQ9UI08 416 aaPredicted RBP9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 TLR6Q9Y2C9 796 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 STON1Q9Y6Q2 735 aa9.46□□□□□ -0.9
SNORD88A-201ENST00000408314 PRRT4C9JH25 899 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 RNF225M0QZC1 329 aaPredicted RBP9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 PES1O00541 588 aaKnown RBP9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 TRIM24O15164 1050 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 ACSL4O60488 711 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 IGLV3-27P01718 113 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 ATP5BP06576 529 aaKnown RBP9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 GLI1P08151 1106 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 SLC2A3P11169 496 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 ACADMP11310 421 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 EEF1GP26641 437 aaKnown RBP9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 OXTRP30559 389 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 RPL34P49207 117 aaKnown RBP9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 SFSWAPQ12872 951 aaKnown RBP9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 ENPP2Q13822 863 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 SF3A2Q15428 464 aaKnown RBP9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 ARHGAP44Q17R89 818 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 MAP7D1Q3KQU3 841 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 WDR45BQ5MNZ6 344 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 SYCP2LQ5T4T6 812 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 STPG1Q5TH74 334 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 TTC39BQ5VTQ0 682 aaPredicted RBP9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 KIAA1324Q6UXG2 1013 aaKnown RBP9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 SERPINA13PQ6UXR4 307 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 CLEC17AQ6ZS10 378 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 TOGARAM2Q6ZUX3 1019 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 SFTPA1Q8IWL2 248 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 ANKRD20A12PQ8NF67 263 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 ZNF606Q8WXB4 792 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 PIGKQ92643 395 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 PIWIL1Q96J94 861 aaKnown RBP9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 CRACR2AQ9BSW2 395 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 SLC4A5Q9BY07 1137 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 PDCL3Q9H2J4 239 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 SYNCQ9H7C4 482 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 TMEM9BQ9NQ34 198 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 ASNSD1Q9NWL6 643 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 CACNA2D2Q9NY47 1150 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 TJP2Q9UDY2 1190 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 PLA2G4CQ9UP65 541 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 DAAM1Q9Y4D1 1078 aa9.45□□□□□ -0.9
SNORD88A-201ENST00000408314 MYO18AQ92614 2054 aaKnown RBP9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 SDK1Q7Z5N4 2213 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 A0A1W2PQF6 199 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 MSI1O43347 362 aaKnown RBP9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 HSF2BPO75031 334 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 MOCS3O95396 460 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 ASLP04424 464 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 PABPC1P11940 636 aaKnown RBP9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 GNSP15586 552 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 POLR2EP19388 210 aaKnown RBP9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 NDUFV2P19404 249 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 SLC9A1P19634 815 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 BCKDHBP21953 392 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 HOXD9P28356 352 aaPredicted RBP9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 HOXC13P31276 330 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 KRT9P35527 623 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 WASP42768 502 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 ATXN3P54252 364 aaPredicted RBP9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 OXCT1P55809 520 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 ST8SIA6P61647 398 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 YWHAZP63104 245 aaKnown RBP9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 CDK17Q00537 523 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 PDCLQ13371 301 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 CDH18Q13634 790 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 GEN1Q17RS7 908 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 VWA3BQ502W6 1294 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 FNDC3BQ53EP0 1204 aaKnown RBP9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 PPM1JQ5JR12 505 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 EFHC1Q5JVL4 640 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 PIK3R6Q5UE93 754 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 PEAR1Q5VY43 1037 aaPredicted RBP9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 TMEM110Q86TL2 294 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 ZDHHC17Q8IUH5 632 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 ATP6V0D2Q8N8Y2 350 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 DQX1Q8TE96 717 aaKnown RBP9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 RLN3Q8WXF3 142 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 NDRG1Q92597 394 aaKnown RBP9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 PRCCQ92733 491 aaPredicted RBP9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 PPP1R9BQ96SB3 815 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 ZSWIM1Q9BR11 485 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 TUBGCP2Q9BSJ2 902 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 PCED1AQ9H1Q7 454 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 LHX5Q9H2C1 402 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 NDST4Q9H3R1 872 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 FAM204AQ9H8W3 233 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 PRDM16Q9HAZ2 1276 aa9.44□□□□□ -0.9
SNORD88A-201ENST00000408314 ZDHHC4Q9NPG8 344 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms