RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ATXN1P54253 815 aaKnown RBP5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 PRKAG1P54619 331 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 DCAF7P61962 342 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 PRKG2Q13237 762 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 CCNIQ14094 377 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 TBCCQ15814 346 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 CERCAMQ5T4B2 595 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 SLC9C2Q5TAH2 1124 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 ICE2Q659A1 982 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 SFRP4Q6FHJ7 346 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 DPY19L2P1Q6NXN4 242 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 RINLQ6ZS11 566 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 GRASPQ7Z6J2 395 aaPredicted RBP5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 USP38Q8NB14 1042 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 SUN3Q8TAQ9 357 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 ATG4AQ8WYN0 398 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 ST8SIA4Q92187 359 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 CPT1BQ92523 772 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 SERINC2Q96SA4 455 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 GPR63Q9BZJ6 419 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 ZCWPW1Q9H0M4 648 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 ABHD16BQ9H3Z7 469 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 NOD2Q9HC29 1040 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 NDUFAF4Q9P032 175 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 POLG2Q9UHN1 485 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 SERTAD3Q9UJW9 196 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 NFU1Q9UMS0 254 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 RABGAP1Q9Y3P9 1069 aa5.54□□□□□ -1.52
HMGB1P13-201ENST00000406019 ARHGEF17Q96PE2 2063 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 GXYLT2A0PJZ3 443 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 EXOC5O00471 708 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 ZNF213O14771 459 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 ZSCAN9O15535 394 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 PPFIA2O75334 1257 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 CYP21A2P08686 494 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 IL6RP08887 468 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 NR2F6P10588 404 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 ZFXP17010 805 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 SERPINA4P29622 427 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 NTSR1P30989 418 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 PGDP52209 483 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 C21orf58P58505 322 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 E2F2Q14209 437 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 ANKRD1Q15327 319 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 GALNTL6Q49A17 601 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 ARHGAP40Q5TG30 622 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 RGS7BPQ6MZT1 257 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 MSANTD2Q6P1R3 559 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 TRABD2AQ86V40 505 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 ARHGEF25Q86VW2 580 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 TMTC2Q8N394 836 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 GOLGA1Q92805 767 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 VOPP1Q96AW1 172 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 ERP27Q96DN0 273 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 C7orf26Q96N11 449 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 HIST1H2AAQ96QV6 131 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 TREX2Q9BQ50 279 aaPredicted RBP5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 PAAF1Q9BRP4 392 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 CHCHD6Q9BRQ6 235 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 PAIP1Q9H074 479 aaKnown RBP5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 CHODLQ9H9P2 273 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 OLA1Q9NTK5 396 aaKnown RBP5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 PTGFRNQ9P2B2 879 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 KCND3Q9UK17 655 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 DNAJC16Q9Y2G8 782 aa5.53□□□□□ -1.52
HMGB1P13-201ENST00000406019 AOX1Q06278 1338 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 GCOM1H8Y6P7 765 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 TMEM63AO94886 807 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 CER1O95813 267 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 HNRNPA1P09651 372 aaKnown RBP eCLIP5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 RBL1P28749 1068 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 GATMP50440 423 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 CASP6P55212 293 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 SOX10P56693 466 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 EIF2B5Q13144 721 aaKnown RBP5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 BMPR2Q13873 1038 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 CSHL1Q14406 222 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 CLCA4Q14CN2 919 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 ACOX1Q15067 660 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 TOMM20Q15388 145 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 CCDC142Q17RM4 750 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 SLC45A4Q5BKX6 768 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 ZNF618Q5T7W0 954 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 CCDC30Q5VVM6 783 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 ATG16L1Q676U5 607 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 DGAT2L7PQ6IED9 249 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 ACAD10Q6JQN1 1059 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 SYCE2Q6PIF2 218 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 FASTKD5Q7L8L6 764 aaKnown RBP5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 RASGRP2Q7LDG7 609 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 SLC15A3Q8IY34 581 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 LRRC71Q8N4P6 559 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 TCP11L2Q8N4U5 519 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 PDILTQ8N807 584 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 TMEM171Q8WVE6 324 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 ATRIPQ8WXE1 791 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 REPS1Q96D71 796 aa5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 ZBTB45Q96K62 511 aaPredicted RBP5.52□□□□□ -1.53
HMGB1P13-201ENST00000406019 BRD8Q9H0E9 1235 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms