RNA–Protein interactions for RNA: ENST00000405025.5

HDAC11-206, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-206ENST00000405025 LIMA1Q9UHB6 759 aaKnown RBP27.36■■□□□ 1.97
HDAC11-206ENST00000405025 CAPN9O14815 690 aa27.35■■□□□ 1.97
HDAC11-206ENST00000405025 HOXB2P14652 356 aa27.35■■□□□ 1.97
HDAC11-206ENST00000405025 ZNF18P17022 549 aa27.35■■□□□ 1.97
HDAC11-206ENST00000405025 NTSR1P30989 418 aa27.35■■□□□ 1.97
HDAC11-206ENST00000405025 YWHAZP63104 245 aaKnown RBP27.35■■□□□ 1.97
HDAC11-206ENST00000405025 TAF3Q5VWG9 929 aa27.35■■□□□ 1.97
HDAC11-206ENST00000405025 CAVIN1Q6NZI2 390 aaKnown RBP27.35■■□□□ 1.97
HDAC11-206ENST00000405025 UNC45BQ8IWX7 931 aa27.35■■□□□ 1.97
HDAC11-206ENST00000405025 CHPFQ8IZ52 775 aa27.35■■□□□ 1.97
HDAC11-206ENST00000405025 AOPEPQ8N6M6 819 aa27.35■■□□□ 1.97
HDAC11-206ENST00000405025 HMGB4Q8WW32 186 aa27.35■■□□□ 1.97
HDAC11-206ENST00000405025 DDX1Q92499 740 aaKnown RBP27.35■■□□□ 1.97
HDAC11-206ENST00000405025 MYEOVQ96EZ4 313 aa27.35■■□□□ 1.97
HDAC11-206ENST00000405025 SLC39A13Q96H72 371 aa27.35■■□□□ 1.97
HDAC11-206ENST00000405025 STK33Q9BYT3 514 aa27.35■■□□□ 1.97
HDAC11-206ENST00000405025 POLMQ9NP87 494 aaPredicted RBP27.35■■□□□ 1.97
HDAC11-206ENST00000405025 FAM207AQ9NSI2 230 aaPredicted RBP27.35■■□□□ 1.97
HDAC11-206ENST00000405025 CACNA2D2Q9NY47 1150 aa27.35■■□□□ 1.97
HDAC11-206ENST00000405025 TLR6Q9Y2C9 796 aa27.35■■□□□ 1.97
HDAC11-206ENST00000405025 SIK3Q9Y2K2 1263 aa27.35■■□□□ 1.97
HDAC11-206ENST00000405025 A0A1W2PQF6 199 aa27.34■■□□□ 1.97
HDAC11-206ENST00000405025 ACSL4O60488 711 aa27.34■■□□□ 1.97
HDAC11-206ENST00000405025 GRAP2O75791 330 aa27.34■■□□□ 1.97
HDAC11-206ENST00000405025 IGLV3-25P01717 112 aa27.34■■□□□ 1.97
HDAC11-206ENST00000405025 BPIFB4P59827 614 aa27.34■■□□□ 1.97
HDAC11-206ENST00000405025 PLK5Q496M5 336 aa27.34■■□□□ 1.97
HDAC11-206ENST00000405025 FKBP15Q5T1M5 1219 aa27.34■■□□□ 1.97
HDAC11-206ENST00000405025 KIAA1211LQ6NV74 962 aa27.34■■□□□ 1.97
HDAC11-206ENST00000405025 NOP9Q86U38 636 aaKnown RBP27.34■■□□□ 1.97
HDAC11-206ENST00000405025 TRIM62Q9BVG3 475 aa27.34■■□□□ 1.97
HDAC11-206ENST00000405025 CD248Q9HCU0 757 aa27.34■■□□□ 1.97
HDAC11-206ENST00000405025 XPO7Q9UIA9 1087 aaKnown RBP27.34■■□□□ 1.97
HDAC11-206ENST00000405025 RAD54BQ9Y620 910 aa27.34■■□□□ 1.97
HDAC11-206ENST00000405025 SPTBN4Q9H254 2564 aa27.34■■□□□ 1.97
HDAC11-206ENST00000405025 WASH3PC4AMC7 463 aa27.33■■□□□ 1.97
HDAC11-206ENST00000405025 ALDH1A2O94788 518 aa27.33■■□□□ 1.97
HDAC11-206ENST00000405025 TPM2P07951 284 aa27.33■■□□□ 1.97
HDAC11-206ENST00000405025 BCKDHBP21953 392 aa27.33■■□□□ 1.97
HDAC11-206ENST00000405025 SLC11A2P49281 568 aa27.33■■□□□ 1.97
HDAC11-206ENST00000405025 NNTQ13423 1086 aa27.33■■□□□ 1.97
HDAC11-206ENST00000405025 ANO6Q4KMQ2 910 aa27.33■■□□□ 1.97
HDAC11-206ENST00000405025 OR6B2Q6IFH4 312 aa27.33■■□□□ 1.97
HDAC11-206ENST00000405025 OLFML1Q6UWY5 402 aa27.33■■□□□ 1.97
HDAC11-206ENST00000405025 APTXQ7Z2E3 356 aaKnown RBP27.33■■□□□ 1.97
HDAC11-206ENST00000405025 ANKS1BQ7Z6G8 1248 aa27.33■■□□□ 1.97
HDAC11-206ENST00000405025 DEFB106AQ8N104 65 aa27.33■■□□□ 1.97
HDAC11-206ENST00000405025 OLIG1Q8TAK6 271 aa27.33■■□□□ 1.97
HDAC11-206ENST00000405025 TMA16Q96EY4 203 aaKnown RBP27.33■■□□□ 1.97
HDAC11-206ENST00000405025 PRICKLE1Q96MT3 831 aaPredicted RBP27.33■■□□□ 1.97
HDAC11-206ENST00000405025 NOX5Q96PH1 765 aa27.33■■□□□ 1.97
HDAC11-206ENST00000405025 SLC2A13Q96QE2 648 aa27.33■■□□□ 1.97
HDAC11-206ENST00000405025 DUSP15Q9H1R2 295 aaPredicted RBP27.33■■□□□ 1.97
HDAC11-206ENST00000405025 BCCIPQ9P287 314 aaKnown RBP eCLIP27.33■■□□□ 1.97
HDAC11-206ENST00000405025 USP18Q9UMW8 372 aa27.33■■□□□ 1.97
HDAC11-206ENST00000405025 DMXL1Q9Y485 3027 aa27.33■■□□□ 1.96
HDAC11-206ENST00000405025 LGALS16A8MUM7 142 aa27.32■■□□□ 1.96
HDAC11-206ENST00000405025 IRAK2O43187 625 aa27.32■■□□□ 1.96
HDAC11-206ENST00000405025 TRUB2O95900 331 aaKnown RBP27.32■■□□□ 1.96
HDAC11-206ENST00000405025 MOCS2O96007 188 aaPredicted RBP27.32■■□□□ 1.96
HDAC11-206ENST00000405025 ZNF445P59923 1031 aa27.32■■□□□ 1.96
HDAC11-206ENST00000405025 POLR2FP61218 127 aaKnown RBP27.32■■□□□ 1.96
HDAC11-206ENST00000405025 SYCP1Q15431 976 aa27.32■■□□□ 1.96
HDAC11-206ENST00000405025 DCAF6Q58WW2 860 aa27.32■■□□□ 1.96
HDAC11-206ENST00000405025 ZC3H12AQ5D1E8 599 aaKnown RBP27.32■■□□□ 1.96
HDAC11-206ENST00000405025 PIK3R6Q5UE93 754 aa27.32■■□□□ 1.96
HDAC11-206ENST00000405025 TMEM215Q68D42 235 aa27.32■■□□□ 1.96
HDAC11-206ENST00000405025 WFDC5Q8TCV5 224 aa27.32■■□□□ 1.96
HDAC11-206ENST00000405025 RLN3Q8WXF3 142 aa27.32■■□□□ 1.96
HDAC11-206ENST00000405025 SORCS1Q8WY21 1168 aa27.32■■□□□ 1.96
HDAC11-206ENST00000405025 AZIN2Q96A70 460 aa27.32■■□□□ 1.96
HDAC11-206ENST00000405025 ZC3H10Q96K80 434 aaKnown RBP27.32■■□□□ 1.96
HDAC11-206ENST00000405025 GABRG3Q99928 467 aa27.32■■□□□ 1.96
HDAC11-206ENST00000405025 SLC2A11Q9BYW1 496 aa27.32■■□□□ 1.96
HDAC11-206ENST00000405025 NUCKS1Q9H1E3 243 aaKnown RBP27.32■■□□□ 1.96
HDAC11-206ENST00000405025 NLRC4Q9NPP4 1024 aa27.32■■□□□ 1.96
HDAC11-206ENST00000405025 CEP83Q9Y592 693 aa27.32■■□□□ 1.96
HDAC11-206ENST00000405025 RALGAPA1Q6GYQ0 2036 aa27.32■■□□□ 1.96
HDAC11-206ENST00000405025 ABCA7Q8IZY2 2146 aa27.31■■□□□ 1.96
HDAC11-206ENST00000405025 GFPT2O94808 682 aa27.31■■□□□ 1.96
HDAC11-206ENST00000405025 ATP1A3P13637 1013 aa27.31■■□□□ 1.96
HDAC11-206ENST00000405025 GABRG2P18507 467 aa27.31■■□□□ 1.96
HDAC11-206ENST00000405025 HLA-FP30511 346 aa27.31■■□□□ 1.96
HDAC11-206ENST00000405025 CDH5P33151 784 aaPredicted RBP27.31■■□□□ 1.96
HDAC11-206ENST00000405025 JAM2P57087 298 aa27.31■■□□□ 1.96
HDAC11-206ENST00000405025 USP39Q53GS9 565 aaKnown RBP27.31■■□□□ 1.96
HDAC11-206ENST00000405025 FRMD1Q8N878 549 aa27.31■■□□□ 1.96
HDAC11-206ENST00000405025 EPS8L1Q8TE68 723 aa27.31■■□□□ 1.96
HDAC11-206ENST00000405025 SLC20A1Q8WUM9 679 aa27.31■■□□□ 1.96
HDAC11-206ENST00000405025 PDCL3Q9H2J4 239 aa27.31■■□□□ 1.96
HDAC11-206ENST00000405025 ASNSD1Q9NWL6 643 aa27.31■■□□□ 1.96
HDAC11-206ENST00000405025 TBL1XO60907 577 aa27.3■■□□□ 1.96
HDAC11-206ENST00000405025 HSF2BPO75031 334 aa27.3■■□□□ 1.96
HDAC11-206ENST00000405025 EPN2O95208 641 aa27.3■■□□□ 1.96
HDAC11-206ENST00000405025 GLI1P08151 1106 aa27.3■■□□□ 1.96
HDAC11-206ENST00000405025 MMEP08473 750 aa27.3■■□□□ 1.96
HDAC11-206ENST00000405025 GBP1P32455 592 aa27.3■■□□□ 1.96
HDAC11-206ENST00000405025 EIF4EBP2Q13542 120 aaPredicted RBP27.3■■□□□ 1.96
HDAC11-206ENST00000405025 CCDC6Q16204 474 aa27.3■■□□□ 1.96
HDAC11-206ENST00000405025 EFHC1Q5JVL4 640 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms