RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 COX16Q9P0S2 106 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 CALCOCO1Q9P1Z2 691 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 FNIP2Q9P278 1114 aa21.79■■□□□ 1.08
TPM1-208ENST00000404484 H3BQ06 376 aaPredicted RBP21.78■■□□□ 1.08
TPM1-208ENST00000404484 LIASO43766 372 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 ABLIM3O94929 683 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 TGM2P21980 687 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 CXCR3P49682 368 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 DRG2P55039 364 aaKnown RBP21.78■■□□□ 1.08
TPM1-208ENST00000404484 RBM10P98175 930 aaKnown RBP21.78■■□□□ 1.08
TPM1-208ENST00000404484 ADCY2Q08462 1091 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 BYSLQ13895 437 aaKnown RBP21.78■■□□□ 1.08
TPM1-208ENST00000404484 PPP1R7Q15435 360 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 AAK1Q2M2I8 961 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 PPP6R3Q5H9R7 873 aaPredicted RBP21.78■■□□□ 1.08
TPM1-208ENST00000404484 MTERF4Q7Z6M4 381 aaKnown RBP21.78■■□□□ 1.08
TPM1-208ENST00000404484 SCD5Q86SK9 330 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 TAC4Q86UU9 113 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 NKD2Q969F2 451 aaPredicted RBP21.78■■□□□ 1.08
TPM1-208ENST00000404484 CCDC114Q96M63 670 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 CRISPLD1Q9H336 500 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 WDR6Q9NNW5 1121 aaKnown RBP21.78■■□□□ 1.08
TPM1-208ENST00000404484 TLR8Q9NR97 1041 aaKnown RBP21.78■■□□□ 1.08
TPM1-208ENST00000404484 CLIC5Q9NZA1 410 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 FBXW11Q9UKB1 542 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 IRAK3Q9Y616 596 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 A0A1W2PQH9 124 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 H3BRJ5 948 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 IGLV3-25P01717 112 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 ATF2P15336 505 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 CA8P35219 290 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 ADRA1BP35368 520 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 VCPP55072 806 aaKnown RBP21.78■■□□□ 1.08
TPM1-208ENST00000404484 DYNLT1P63172 113 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 CA9Q16790 459 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 ANKRD20A8PQ5CZ79 823 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 MSANTD2Q6P1R3 559 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 VN1R2Q8NFZ6 395 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 OLA1Q9NTK5 396 aaKnown RBP21.78■■□□□ 1.08
TPM1-208ENST00000404484 DRG1Q9Y295 367 aaKnown RBP21.78■■□□□ 1.08
TPM1-208ENST00000404484 NCOR1O75376 2440 aa21.78■■□□□ 1.08
TPM1-208ENST00000404484 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.77■■□□□ 1.08
TPM1-208ENST00000404484 APOL1O14791 398 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 LILRB3O75022 631 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 TBX10O75333 385 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 GLP2RO95838 553 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 BMP1P13497 986 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 KCNJ1P48048 391 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 MMRN1Q13201 1228 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 KCNC3Q14003 757 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 LEXMQ3ZCV2 418 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 TJAP1Q5JTD0 557 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 BRMS1LQ5PSV4 323 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 DUPD1Q68J44 220 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 EMBQ6PCB8 327 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 ADAM32Q8TC27 787 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 CCHCR1Q8TD31 782 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 CASKIN2Q8WXE0 1202 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 IFT81Q8WYA0 676 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 SERPINB11Q96P15 392 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 KCTD15Q96SI1 283 aaPredicted RBP21.77■■□□□ 1.08
TPM1-208ENST00000404484 CDCA3Q99618 268 aaPredicted RBP21.77■■□□□ 1.08
TPM1-208ENST00000404484 TRIM51Q9BSJ1 452 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 TTLL2Q9BWV7 592 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 FAM129AQ9BZQ8 928 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 PLEKHA4Q9H4M7 779 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 WDCPQ9H6R7 721 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 GMIPQ9P107 970 aa21.77■■□□□ 1.08
TPM1-208ENST00000404484 ZSCAN5CA6NGD5 496 aaPredicted RBP21.76■■□□□ 1.07
TPM1-208ENST00000404484 SLC38A8A6NNN8 435 aa21.76■■□□□ 1.07
TPM1-208ENST00000404484 MCF2LO15068 1137 aa21.76■■□□□ 1.07
TPM1-208ENST00000404484 IRAK2O43187 625 aa21.76■■□□□ 1.07
TPM1-208ENST00000404484 SOAT2O75908 522 aa21.76■■□□□ 1.07
TPM1-208ENST00000404484 ITGAVP06756 1048 aa21.76■■□□□ 1.07
TPM1-208ENST00000404484 IL4RP24394 825 aa21.76■■□□□ 1.07
TPM1-208ENST00000404484 ELF1P32519 619 aa21.76■■□□□ 1.07
TPM1-208ENST00000404484 USP46P62068 366 aa21.76■■□□□ 1.07
TPM1-208ENST00000404484 OTUD4Q01804 1114 aaKnown RBP21.76■■□□□ 1.07
TPM1-208ENST00000404484 BEND6Q5SZJ8 279 aaPredicted RBP21.76■■□□□ 1.07
TPM1-208ENST00000404484 SLC9A4Q6AI14 798 aa21.76■■□□□ 1.07
TPM1-208ENST00000404484 PDZD8Q8NEN9 1154 aa21.76■■□□□ 1.07
TPM1-208ENST00000404484 SLC35B2Q8TB61 432 aa21.76■■□□□ 1.07
TPM1-208ENST00000404484 ACTL9Q8TC94 416 aa21.76■■□□□ 1.07
TPM1-208ENST00000404484 P3H4Q92791 437 aa21.76■■□□□ 1.07
TPM1-208ENST00000404484 RNF34Q969K3 372 aa21.76■■□□□ 1.07
TPM1-208ENST00000404484 RXFP1Q9HBX9 757 aa21.76■■□□□ 1.07
TPM1-208ENST00000404484 CLEC1BQ9P126 229 aa21.76■■□□□ 1.07
TPM1-208ENST00000404484 ZNF148Q9UQR1 794 aa21.76■■□□□ 1.07
TPM1-208ENST00000404484 CUL9Q8IWT3 2517 aa21.76■■□□□ 1.07
TPM1-208ENST00000404484 ESYT3A0FGR9 886 aa21.75■■□□□ 1.07
TPM1-208ENST00000404484 CLASP2O75122 1294 aaKnown RBP21.75■■□□□ 1.07
TPM1-208ENST00000404484 ALDH1A3P47895 512 aa21.75■■□□□ 1.07
TPM1-208ENST00000404484 CARSP49589 748 aaKnown RBP21.75■■□□□ 1.07
TPM1-208ENST00000404484 PTK6Q13882 451 aa21.75■■□□□ 1.07
TPM1-208ENST00000404484 HLTFQ14527 1009 aaKnown RBP eCLIP21.75■■□□□ 1.07
TPM1-208ENST00000404484 OVCA2Q8WZ82 227 aa21.75■■□□□ 1.07
TPM1-208ENST00000404484 CSPG4P5Q96PW8 444 aa21.75■■□□□ 1.07
TPM1-208ENST00000404484 CDK5RAP1Q96SZ6 601 aaKnown RBP21.75■■□□□ 1.07
TPM1-208ENST00000404484 NMUR1Q9HB89 426 aa21.75■■□□□ 1.07
TPM1-208ENST00000404484 CYP4F11Q9HBI6 524 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms