RNA–Protein interactions for RNA: ENST00000403441.1

PRAME-204, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-204ENST00000403441 TRIM49CP0CI26 452 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 MAOBP27338 520 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 GTF2H1P32780 548 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 IL12RB1P42701 662 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 GCLMP48507 274 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 SLC8A3P57103 927 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 FKBP3Q00688 224 aaKnown RBP12.93□□□□□ -0.34
PRAME-204ENST00000403441 ARID5AQ03989 594 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 EFEMP1Q12805 493 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 GEN1Q17RS7 908 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 FYB2Q5VWT5 728 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 IL27RAQ6UWB1 636 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 PROSER1Q86XN7 944 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 TMPRSS6Q8IU80 811 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 TTC39CQ8N584 583 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 TAS1R2Q8TE23 839 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 ADAMTS14Q8WXS8 1223 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 DNASE2BQ8WZ79 361 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 SIPA1Q96FS4 1042 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 FAXDC2Q96IV6 333 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 HEXIM2Q96MH2 286 aaKnown RBP12.93□□□□□ -0.34
PRAME-204ENST00000403441 CIPCQ9C0C6 399 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 MKRN2Q9H000 416 aaKnown RBP12.93□□□□□ -0.34
PRAME-204ENST00000403441 APOBEC3GQ9HC16 384 aaKnown RBP12.93□□□□□ -0.34
PRAME-204ENST00000403441 ITM2CQ9NQX7 267 aa12.93□□□□□ -0.34
PRAME-204ENST00000403441 WSB2Q9NYS7 404 aaPredicted RBP12.93□□□□□ -0.34
PRAME-204ENST00000403441 BCAT2O15382 392 aaPredicted RBP12.92□□□□□ -0.34
PRAME-204ENST00000403441 MATKP42679 507 aa12.92□□□□□ -0.34
PRAME-204ENST00000403441 TPMTP51580 245 aa12.92□□□□□ -0.34
PRAME-204ENST00000403441 ENPP2Q13822 863 aa12.92□□□□□ -0.34
PRAME-204ENST00000403441 ZNF234Q14588 700 aa12.92□□□□□ -0.34
PRAME-204ENST00000403441 ACAP1Q15027 740 aa12.92□□□□□ -0.34
PRAME-204ENST00000403441 PPP1R26Q5T8A7 1209 aaPredicted RBP12.92□□□□□ -0.34
PRAME-204ENST00000403441 DCAF12L1Q5VU92 463 aa12.92□□□□□ -0.34
PRAME-204ENST00000403441 SERPINA13PQ6UXR4 307 aa12.92□□□□□ -0.34
PRAME-204ENST00000403441 DENND1CQ8IV53 801 aa12.92□□□□□ -0.34
PRAME-204ENST00000403441 SETD7Q8WTS6 366 aaKnown RBP12.92□□□□□ -0.34
PRAME-204ENST00000403441 DDI1Q8WTU0 396 aa12.92□□□□□ -0.34
PRAME-204ENST00000403441 CEP63Q96MT8 703 aa12.92□□□□□ -0.34
PRAME-204ENST00000403441 NUP58Q9BVL2 599 aa12.92□□□□□ -0.34
PRAME-204ENST00000403441 SLC2A11Q9BYW1 496 aa12.92□□□□□ -0.34
PRAME-204ENST00000403441 PCED1AQ9H1Q7 454 aa12.92□□□□□ -0.34
PRAME-204ENST00000403441 CLSTN2Q9H4D0 955 aa12.92□□□□□ -0.34
PRAME-204ENST00000403441 GAREM1Q9H706 876 aa12.92□□□□□ -0.34
PRAME-204ENST00000403441 MMRN2Q9H8L6 949 aa12.92□□□□□ -0.34
PRAME-204ENST00000403441 TMEM8AQ9HCN3 771 aa12.92□□□□□ -0.34
PRAME-204ENST00000403441 ELOVL2Q9NXB9 296 aa12.92□□□□□ -0.34
PRAME-204ENST00000403441 MARCH2Q9P0N8 246 aa12.92□□□□□ -0.34
PRAME-204ENST00000403441 AGO1Q9UL18 857 aaKnown RBP12.92□□□□□ -0.34
PRAME-204ENST00000403441 COQ4Q9Y3A0 265 aa12.92□□□□□ -0.34
PRAME-204ENST00000403441 USP3Q9Y6I4 520 aa12.92□□□□□ -0.34
PRAME-204ENST00000403441 ITPR1Q14643 2758 aa12.91□□□□□ -0.34
PRAME-204ENST00000403441 KCNJ18B7U540 433 aa12.91□□□□□ -0.34
PRAME-204ENST00000403441 PMM2O15305 246 aa12.91□□□□□ -0.34
PRAME-204ENST00000403441 TIMM44O43615 452 aa12.91□□□□□ -0.34
PRAME-204ENST00000403441 IGLV3-19P01714 112 aa12.91□□□□□ -0.34
PRAME-204ENST00000403441 EPHX1P07099 455 aa12.91□□□□□ -0.34
PRAME-204ENST00000403441 ZNF883P0CG24 379 aa12.91□□□□□ -0.34
PRAME-204ENST00000403441 EPB41P11171 864 aaKnown RBP12.91□□□□□ -0.34
PRAME-204ENST00000403441 HOXB3P14651 431 aaPredicted RBP12.91□□□□□ -0.34
PRAME-204ENST00000403441 MARSP56192 900 aaKnown RBP12.91□□□□□ -0.34
PRAME-204ENST00000403441 YWHAGP61981 247 aaKnown RBP eCLIP12.91□□□□□ -0.34
PRAME-204ENST00000403441 SCAPQ12770 1279 aa12.91□□□□□ -0.34
PRAME-204ENST00000403441 STIM1Q13586 685 aa12.91□□□□□ -0.34
PRAME-204ENST00000403441 ZNF394Q53GI3 561 aa12.91□□□□□ -0.34
PRAME-204ENST00000403441 GLRX5Q86SX6 157 aa12.91□□□□□ -0.34
PRAME-204ENST00000403441 CACUL1Q86Y37 369 aa12.91□□□□□ -0.34
PRAME-204ENST00000403441 CPXM2Q8N436 756 aa12.91□□□□□ -0.34
PRAME-204ENST00000403441 PNPLA1Q8N8W4 532 aa12.91□□□□□ -0.34
PRAME-204ENST00000403441 SLC35C1Q96A29 364 aa12.91□□□□□ -0.34
PRAME-204ENST00000403441 PLD4Q96BZ4 506 aa12.91□□□□□ -0.34
PRAME-204ENST00000403441 EEF2KMTQ96G04 330 aa12.91□□□□□ -0.34
PRAME-204ENST00000403441 P2RY11Q96G91 374 aa12.91□□□□□ -0.34
PRAME-204ENST00000403441 PIWIL1Q96J94 861 aaKnown RBP12.91□□□□□ -0.34
PRAME-204ENST00000403441 MED15Q96RN5 788 aa12.91□□□□□ -0.34
PRAME-204ENST00000403441 TSG101Q99816 390 aa12.91□□□□□ -0.34
PRAME-204ENST00000403441 PCOLCE2Q9UKZ9 415 aa12.91□□□□□ -0.34
PRAME-204ENST00000403441 FASNP49327 2511 aaKnown RBP12.9□□□□□ -0.34
PRAME-204ENST00000403441 SLC12A8A0AV02 714 aa12.9□□□□□ -0.34
PRAME-204ENST00000403441 METTL12A8MUP2 240 aa12.9□□□□□ -0.34
PRAME-204ENST00000403441 PRKCHP24723 683 aa12.9□□□□□ -0.34
PRAME-204ENST00000403441 HARS2P49590 506 aaKnown RBP12.9□□□□□ -0.34
PRAME-204ENST00000403441 AFF3P51826 1226 aaKnown RBP12.9□□□□□ -0.34
PRAME-204ENST00000403441 FNDC3BQ53EP0 1204 aaKnown RBP12.9□□□□□ -0.34
PRAME-204ENST00000403441 KRT39Q6A163 491 aa12.9□□□□□ -0.34
PRAME-204ENST00000403441 ISM2Q6H9L7 571 aa12.9□□□□□ -0.34
PRAME-204ENST00000403441 CCNI2Q6ZMN8 369 aaPredicted RBP12.9□□□□□ -0.34
PRAME-204ENST00000403441 FAM124AQ86V42 546 aa12.9□□□□□ -0.34
PRAME-204ENST00000403441 SORCS1Q8WY21 1168 aa12.9□□□□□ -0.34
PRAME-204ENST00000403441 SNX19Q92543 992 aa12.9□□□□□ -0.34
PRAME-204ENST00000403441 CDC6Q99741 560 aa12.9□□□□□ -0.34
PRAME-204ENST00000403441 UBXN6Q9BZV1 441 aa12.9□□□□□ -0.34
PRAME-204ENST00000403441 CCDC86Q9H6F5 360 aaKnown RBP12.9□□□□□ -0.34
PRAME-204ENST00000403441 IL21RQ9HBE5 538 aa12.9□□□□□ -0.34
PRAME-204ENST00000403441 TM7SF3Q9NS93 570 aa12.9□□□□□ -0.34
PRAME-204ENST00000403441 CISHQ9NSE2 258 aa12.9□□□□□ -0.34
PRAME-204ENST00000403441 OLA1Q9NTK5 396 aaKnown RBP12.9□□□□□ -0.34
PRAME-204ENST00000403441 EIF2B4Q9UI10 523 aaKnown RBP12.9□□□□□ -0.34
PRAME-204ENST00000403441 FNDC3AQ9Y2H6 1198 aaKnown RBP12.9□□□□□ -0.34
PRAME-204ENST00000403441 BICDL2A1A5D9 508 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms