RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 VDRP11473 427 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 SMPD1P17405 629 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 TCF7P36402 384 aaPredicted RBP20.48■□□□□ 0.87
CCDC47-202ENST00000403162 OSTNP61366 133 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 ARHGAP1Q07960 439 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 C15orf59Q2T9L4 293 aaPredicted RBP20.48■□□□□ 0.87
CCDC47-202ENST00000403162 RAB6CQ53S08 254 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 FAXCQ5TGI0 409 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 TMCO4Q5TGY1 634 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 TIFABQ6ZNK6 161 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 NDUFAF2Q8N183 169 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 CEP120Q8N960 986 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 PHC3Q8NDX5 983 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 GPR20Q99678 358 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 THTPAQ9BU02 230 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 BEGAINQ9BUH8 593 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 RAB6CQ9H0N0 254 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 CYP3A43Q9HB55 503 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 PCMTD2Q9NV79 361 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 THAP1Q9NVV9 213 aa20.48■□□□□ 0.87
CCDC47-202ENST00000403162 SDR42E2A6NKP2 422 aa20.47■□□□□ 0.87
CCDC47-202ENST00000403162 FKTNO75072 461 aa20.47■□□□□ 0.87
CCDC47-202ENST00000403162 AOC1P19801 751 aa20.47■□□□□ 0.87
CCDC47-202ENST00000403162 HOXD10P28358 340 aa20.47■□□□□ 0.87
CCDC47-202ENST00000403162 BCAR1P56945 870 aa20.47■□□□□ 0.87
CCDC47-202ENST00000403162 STX3Q13277 289 aa20.47■□□□□ 0.87
CCDC47-202ENST00000403162 LAMC2Q13753 1193 aa20.47■□□□□ 0.87
CCDC47-202ENST00000403162 BOLA3Q53S33 107 aa20.47■□□□□ 0.87
CCDC47-202ENST00000403162 MDH1BQ5I0G3 518 aa20.47■□□□□ 0.87
CCDC47-202ENST00000403162 RFX8Q6ZV50 586 aa20.47■□□□□ 0.87
CCDC47-202ENST00000403162 EXOC8Q8IYI6 725 aa20.47■□□□□ 0.87
CCDC47-202ENST00000403162 STKLD1Q8NE28 680 aa20.47■□□□□ 0.87
CCDC47-202ENST00000403162 C20orf27Q9GZN8 174 aa20.47■□□□□ 0.87
CCDC47-202ENST00000403162 MIS12Q9H081 205 aa20.47■□□□□ 0.87
CCDC47-202ENST00000403162 FZD8Q9H461 694 aa20.47■□□□□ 0.87
CCDC47-202ENST00000403162 RPF1Q9H9Y2 349 aaKnown RBP20.47■□□□□ 0.87
CCDC47-202ENST00000403162 PIDD1Q9HB75 910 aa20.47■□□□□ 0.87
CCDC47-202ENST00000403162 NDE1Q9NXR1 346 aa20.47■□□□□ 0.87
CCDC47-202ENST00000403162 MYCNP04198 464 aaPredicted RBP20.46■□□□□ 0.87
CCDC47-202ENST00000403162 ZNF865P0CJ78 1059 aaPredicted RBP20.46■□□□□ 0.87
CCDC47-202ENST00000403162 CXCL8P10145 99 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 KITP10721 976 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 CRABP2P29373 138 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 ALDH18A1P54886 795 aaKnown RBP20.46■□□□□ 0.87
CCDC47-202ENST00000403162 DSG1Q02413 1049 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 TNFAIP2Q03169 654 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 DUSP28Q4G0W2 176 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 STXBP5Q5T5C0 1151 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 ZNF296Q8WUU4 475 aaPredicted RBP20.46■□□□□ 0.87
CCDC47-202ENST00000403162 TRIB2Q92519 343 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 CLPTM1LQ96KA5 538 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 SIGLEC10Q96LC7 697 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 EBNA1BP2Q99848 306 aaKnown RBP20.46■□□□□ 0.87
CCDC47-202ENST00000403162 FAM192AQ9GZU8 254 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 VRTNQ9H8Y1 702 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 MARCOQ9UEW3 520 aaPredicted RBP20.46■□□□□ 0.87
CCDC47-202ENST00000403162 HEY1Q9Y5J3 304 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 PRR5-ARHGAP8B1AHC4 643 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 DPYSL4O14531 572 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 FKBP6O75344 327 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 IGHA2P01877 340 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 ATICP31939 592 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 ARHGAP8P85298 464 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 FOXB2Q5VYV0 432 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 MFSD14CQ5VZR4 134 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 EEF1DP3Q658K8 133 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 FAM183BPQ6ZVS7 135 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 ZNF534Q76KX8 674 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 ADGRG6Q86SQ4 1221 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 RILPQ96NA2 401 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 PPP1R12CQ9BZL4 782 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 CDT1Q9H211 546 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 STN1Q9H668 368 aaKnown RBP20.46■□□□□ 0.87
CCDC47-202ENST00000403162 PCDH18Q9HCL0 1135 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 SRRDQ9UH36 339 aa20.46■□□□□ 0.87
CCDC47-202ENST00000403162 NFICP08651 508 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 TPSB2P20231 275 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 CNTFP26441 200 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 CPOXP36551 454 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 TPSAB1Q15661 275 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 C1orf146Q5VVC0 180 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 TRMT10BQ6PF06 316 aaKnown RBP20.45■□□□□ 0.86
CCDC47-202ENST00000403162 IZUMO2Q6UXV1 221 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 LRRC71Q8N4P6 559 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 PCDH19Q8TAB3 1148 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 CXorf38Q8TB03 319 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 ECSITQ9BQ95 431 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 CCDC28BQ9BUN5 200 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 XAB2Q9HCS7 855 aaKnown RBP20.45■□□□□ 0.86
CCDC47-202ENST00000403162 SOX13Q9UN79 622 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 PCDHA11Q9Y5I1 949 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 ZBTB42B2RXF5 422 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 B4GALT5O43286 388 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 ADCY6O43306 1168 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 SNUPNO95149 360 aaKnown RBP20.45■□□□□ 0.86
CCDC47-202ENST00000403162 SARNPP82979 210 aaKnown RBP20.45■□□□□ 0.86
CCDC47-202ENST00000403162 IRF5Q13568 498 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 CDO1Q16878 200 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 FAM182AQ5T1J6 154 aa20.45■□□□□ 0.86
CCDC47-202ENST00000403162 MROH9Q5TGP6 573 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms