RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 HTRA4P83105 476 aaPredicted RBP13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 XRCC4Q13426 336 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 MTMR3Q13615 1198 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 BRMS1LQ5PSV4 323 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 TPGS2Q68CL5 300 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 HIBCHQ6NVY1 386 aaPredicted RBP13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 MSANTD2Q6P1R3 559 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 RFX8Q6ZV50 586 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 B4GALNT4Q76KP1 1039 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 BZW1Q7L1Q6 419 aaKnown RBP13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 TSPYL1Q9H0U9 437 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 OSBPL2Q9H1P3 480 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 TLR8Q9NR97 1041 aaKnown RBP13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 ARHGEF38Q9NXL2 777 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 HSFX1Q9UBD0 423 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 OR12D3Q9UGF7 316 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 TPX2Q9ULW0 747 aaKnown RBP13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 PCDHB12Q9Y5F1 795 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 COL4A4P53420 1690 aaPredicted RBP13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 CFAP69A5D8W1 941 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 RRP9O43818 475 aaKnown RBP13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 MAP3K6O95382 1288 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 RARGP13631 454 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 ATF6P18850 670 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 CCR1P32246 355 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 PPM1AP35813 382 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 GGCXP38435 758 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 DPYSQ14117 519 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 PPP2R5DQ14738 602 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 SLMAPQ14BN4 828 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 UAP1Q16222 522 aaPredicted RBP13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 SPDYCQ5MJ68 293 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 TMEM240Q5SV17 173 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 RASIP1Q5U651 963 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 VPS52Q8N1B4 723 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 FIBCD1Q8N539 461 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 SERPINB11Q96P15 392 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 ZIM3Q96PE6 472 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 HAPLN3Q96S86 360 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 DTLQ9NZJ0 730 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 MFHAS1Q9Y4C4 1052 aa13.76□□□□□ -0.21
CEACAM1-206ENST00000403136 NDC80O14777 642 aa13.75□□□□□ -0.21
CEACAM1-206ENST00000403136 SEC24AO95486 1093 aa13.75□□□□□ -0.21
CEACAM1-206ENST00000403136 SYF2O95926 243 aaKnown RBP13.75□□□□□ -0.21
CEACAM1-206ENST00000403136 URODP06132 367 aa13.75□□□□□ -0.21
CEACAM1-206ENST00000403136 ERCC2P18074 760 aa13.75□□□□□ -0.21
CEACAM1-206ENST00000403136 RBL1P28749 1068 aa13.75□□□□□ -0.21
CEACAM1-206ENST00000403136 PMS2P54278 862 aa13.75□□□□□ -0.21
CEACAM1-206ENST00000403136 TPI1P60174 286 aa13.75□□□□□ -0.21
CEACAM1-206ENST00000403136 FAM193AP78312 1265 aa13.75□□□□□ -0.21
CEACAM1-206ENST00000403136 RAB33AQ14088 237 aa13.75□□□□□ -0.21
CEACAM1-206ENST00000403136 PAFAH1B3Q15102 231 aaKnown RBP13.75□□□□□ -0.21
CEACAM1-206ENST00000403136 GPR65Q8IYL9 337 aa13.75□□□□□ -0.21
CEACAM1-206ENST00000403136 UBLCP1Q8WVY7 318 aaPredicted RBP13.75□□□□□ -0.21
CEACAM1-206ENST00000403136 EPAS1Q99814 870 aa13.75□□□□□ -0.21
CEACAM1-206ENST00000403136 ZBED2Q9BTP6 218 aa13.75□□□□□ -0.21
CEACAM1-206ENST00000403136 TTLL2Q9BWV7 592 aa13.75□□□□□ -0.21
CEACAM1-206ENST00000403136 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.75□□□□□ -0.21
CEACAM1-206ENST00000403136 CXXC1Q9P0U4 656 aaPredicted RBP13.75□□□□□ -0.21
CEACAM1-206ENST00000403136 INSL6Q9Y581 213 aa13.75□□□□□ -0.21
CEACAM1-206ENST00000403136 SNX10Q9Y5X0 201 aa13.75□□□□□ -0.21
CEACAM1-206ENST00000403136 KCNU1A8MYU2 1149 aa13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 H3BQF6 201 aa13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 DCLK1O15075 740 aa13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 KCNN4O15554 427 aa13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 MSI1O43347 362 aaKnown RBP13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 ZDHHC11BP0C7U3 371 aa13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 HSP90B2PQ58FF3 399 aa13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 SLC45A4Q5BKX6 768 aa13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 PCGF5Q86SE9 256 aa13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 CDKL3Q8IVW4 592 aaPredicted RBP13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 RTP4Q96DX8 246 aa13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 SLC39A13Q96H72 371 aa13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 FOXP3Q9BZS1 431 aa13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 UBE2OQ9C0C9 1292 aaKnown RBP13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 CYP4F11Q9HBI6 524 aa13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 MED4Q9NPJ6 270 aa13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 MRPL17Q9NRX2 175 aaKnown RBP13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 OLA1Q9NTK5 396 aaKnown RBP13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 STK39Q9UEW8 545 aa13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 PLAAQ9Y263 795 aa13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 TLR6Q9Y2C9 796 aa13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 PATJQ8NI35 1801 aa13.74□□□□□ -0.21
CEACAM1-206ENST00000403136 HACD1B0YJ81 288 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 LILRB3O75022 631 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 PAGE1O75459 146 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 FGF18O76093 207 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 LRIG2O94898 1065 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 TBX18O95935 607 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 LINC00271P0C7V0 271 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 CHKAP35790 457 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 NRLP54845 237 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 MORF4L2Q15014 288 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 RNASEH2BQ5TBB1 312 aaKnown RBP13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 PSRC1Q6PGN9 363 aaPredicted RBP13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 LRIG3Q6UXM1 1119 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 PDZD4Q76G19 769 aaPredicted RBP13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 CCDC25Q86WR0 208 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 C7orf61Q8IZ16 206 aa13.73□□□□□ -0.21
CEACAM1-206ENST00000403136 AUTS2Q8WXX7 1259 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms