RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 RINLQ6ZS11 566 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 TLK2Q86UE8 772 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 ZNF354CQ86Y25 554 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 TNS4Q8IZW8 715 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 PNPLA1Q8N8W4 532 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 OR52K1Q8NGK4 314 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 CFAP61Q8NHU2 1237 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 FBXO27Q8NI29 283 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 CXorf38Q8TB03 319 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 TFB1MQ8WVM0 346 aaKnown RBP4.5□□□□□ -1.69
SMC6-203ENST00000402989 BRI3BPQ8WY22 251 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 KHSRPQ92945 711 aaKnown RBP eCLIP4.5□□□□□ -1.691e-6■□□□□ 11.1
SMC6-203ENST00000402989 ZNF669Q96BR6 464 aaPredicted RBP4.5□□□□□ -1.69
SMC6-203ENST00000402989 SNX27Q96L92 541 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 TINF2Q9BSI4 451 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 PPP1R12CQ9BZL4 782 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 PRDM12Q9H4Q4 367 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 DENND2DQ9H6A0 471 aaPredicted RBP4.5□□□□□ -1.69
SMC6-203ENST00000402989 CAB39LQ9H9S4 337 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 SYBUQ9NX95 663 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 KANSL3Q9P2N6 904 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 C15orf41Q9Y2V0 281 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 C2CD2Q9Y426 696 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.5□□□□□ -1.69
SMC6-203ENST00000402989 WDR90Q96KV7 1748 aa4.5□□□□□ -1.69
SMC6-203ENST00000402989 SHROOM3Q8TF72 1996 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 LOC100653049A0A140TA62 436 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 B2RBV5 119 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 FAM72CH0Y354 149 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 EEF2KO00418 725 aaKnown RBP4.49□□□□□ -1.69
SMC6-203ENST00000402989 NEMP1O14524 444 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 TPP1O14773 563 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 KRT34O76011 436 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 KRT36O76013 467 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 C6orf222P0C671 652 aaPredicted RBP4.49□□□□□ -1.69
SMC6-203ENST00000402989 GM2AP17900 193 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 PTPN7P35236 360 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 TAF6P49848 677 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 RASSF2P50749 326 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 BCAT1P54687 386 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 PDK2Q15119 407 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 RASA2Q15283 850 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 RCN1Q15293 331 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 ZNF792Q3KQV3 632 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 SLC45A4Q5BKX6 768 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 SWT1Q5T5J6 900 aaKnown RBP4.49□□□□□ -1.69
SMC6-203ENST00000402989 N4BP2L1Q5TBK1 243 aaPredicted RBP4.49□□□□□ -1.69
SMC6-203ENST00000402989 VWA5B1Q5TIE3 1220 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 FAM72AQ5TYM5 149 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 FAM72DQ6L9T8 149 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 MAMDC4Q6UXC1 1216 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 FAM72BQ86X60 149 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 RELL1Q8IUW5 271 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 ARRDC4Q8NCT1 418 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 RNF139Q8WU17 664 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 SLC35F5Q8WV83 523 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 HTR3CQ8WXA8 447 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 STMN2Q93045 179 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 MAML3Q96JK9 1138 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 GAD1Q99259 594 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 MIPEPQ99797 713 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 EBF4Q9BQW3 602 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 ULBP1Q9BZM6 244 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 ATXN3LQ9H3M9 355 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 SLC24A3Q9HC58 644 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 VTA1Q9NP79 307 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 DDIT4Q9NX09 232 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 ZFATQ9P243 1243 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 MCM8Q9UJA3 840 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 RPS6KL1Q9Y6S9 549 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 DFFAO00273 331 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 TM9SF1O15321 606 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 CHADO15335 359 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 AP1G2O75843 785 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 NEBLO76041 1014 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 STK10O94804 968 aaKnown RBP4.49□□□□□ -1.69
SMC6-203ENST00000402989 POMCP01189 267 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 TYK2P29597 1187 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 PGM1P36871 562 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 GABRB2P47870 512 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 GLRBP48167 497 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 MCCD1P59942 119 aaPredicted RBP4.49□□□□□ -1.69
SMC6-203ENST00000402989 INCA1Q0VD86 236 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 MFSD10Q14728 455 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 DLG2Q15700 870 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 NCBP2-AS2Q69YL0 99 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 SPATA6LQ8N4H0 392 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 SHKBP1Q8TBC3 707 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 MZB1Q8WU39 189 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 KBTBD7Q8WVZ9 684 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 SLC7A6OSQ96CW6 309 aaPredicted RBP4.49□□□□□ -1.69
SMC6-203ENST00000402989 P2RY11Q96G91 374 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 ZNF570Q96NI8 536 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 TTC1Q99614 292 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 PAAF1Q9BRP4 392 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 THTPAQ9BU02 230 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 MAN1C1Q9NR34 630 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 ARHGEF4Q9NR80 690 aa4.49□□□□□ -1.69
SMC6-203ENST00000402989 DDX43Q9NXZ2 648 aaKnown RBP4.49□□□□□ -1.69
SMC6-203ENST00000402989 SLC5A4Q9NY91 659 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms