RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 FAM133BQ5BKY9 247 aaKnown RBP19.96■□□□□ 0.79
RTN4-207ENST00000402434 ZC3H12AQ5D1E8 599 aaKnown RBP19.96■□□□□ 0.79
RTN4-207ENST00000402434 FAM102AQ5T9C2 384 aaPredicted RBP19.96■□□□□ 0.79
RTN4-207ENST00000402434 SFMBT2Q5VUG0 894 aa19.96■□□□□ 0.79
RTN4-207ENST00000402434 E4F1Q66K89 784 aaPredicted RBP19.96■□□□□ 0.79
RTN4-207ENST00000402434 TERB1Q8NA31 727 aa19.96■□□□□ 0.79
RTN4-207ENST00000402434 RNF214Q8ND24 703 aa19.96■□□□□ 0.79
RTN4-207ENST00000402434 USP33Q8TEY7 942 aa19.96■□□□□ 0.79
RTN4-207ENST00000402434 ATOH1Q92858 354 aaPredicted RBP19.96■□□□□ 0.79
RTN4-207ENST00000402434 BHMTQ93088 406 aa19.96■□□□□ 0.79
RTN4-207ENST00000402434 NPY6RQ99463 290 aa19.96■□□□□ 0.79
RTN4-207ENST00000402434 XPO4Q9C0E2 1151 aaKnown RBP19.96■□□□□ 0.79
RTN4-207ENST00000402434 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.96■□□□□ 0.79
RTN4-207ENST00000402434 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.96■□□□□ 0.79
RTN4-207ENST00000402434 FAM170AA1A519 330 aa19.95■□□□□ 0.78
RTN4-207ENST00000402434 KCNU1A8MYU2 1149 aa19.95■□□□□ 0.78
RTN4-207ENST00000402434 TRIM24O15164 1050 aa19.95■□□□□ 0.78
RTN4-207ENST00000402434 SLC2A3P11169 496 aa19.95■□□□□ 0.78
RTN4-207ENST00000402434 KIR2DL1P43626 348 aaPredicted RBP19.95■□□□□ 0.78
RTN4-207ENST00000402434 NSFP46459 744 aaKnown RBP19.95■□□□□ 0.78
RTN4-207ENST00000402434 RNASE9P60153 205 aaKnown RBP19.95■□□□□ 0.78
RTN4-207ENST00000402434 CSTF1Q05048 431 aaKnown RBP19.95■□□□□ 0.78
RTN4-207ENST00000402434 KDSRQ06136 332 aa19.95■□□□□ 0.78
RTN4-207ENST00000402434 RNF43Q68DV7 783 aa19.95■□□□□ 0.78
RTN4-207ENST00000402434 NADSYN1Q6IA69 706 aa19.95■□□□□ 0.78
RTN4-207ENST00000402434 GRAMD4Q6IC98 578 aa19.95■□□□□ 0.78
RTN4-207ENST00000402434 NUDT18Q6ZVK8 323 aa19.95■□□□□ 0.78
RTN4-207ENST00000402434 TMA16Q96EY4 203 aaKnown RBP19.95■□□□□ 0.78
RTN4-207ENST00000402434 DDIT4Q9NX09 232 aa19.95■□□□□ 0.78
RTN4-207ENST00000402434 SLC27A6Q9Y2P4 619 aa19.95■□□□□ 0.78
RTN4-207ENST00000402434 MYO18AQ92614 2054 aaKnown RBP19.95■□□□□ 0.78
RTN4-207ENST00000402434 TBC1D3BA6NDS4 549 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 ANTXRLA6NF34 631 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 TPM3P06753 285 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 HOXD9P28356 352 aaPredicted RBP19.94■□□□□ 0.78
RTN4-207ENST00000402434 HOXA6P31267 233 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 SLC6A4P31645 630 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 DGKGP49619 791 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 GSCP56915 257 aaPredicted RBP19.94■□□□□ 0.78
RTN4-207ENST00000402434 MRPS21P82921 87 aaKnown RBP19.94■□□□□ 0.78
RTN4-207ENST00000402434 ASIC2Q16515 512 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 MPP7Q5T2T1 576 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 PIK3R6Q5UE93 754 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 RPLP0P6Q8NHW5 317 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 KCNV2Q8TDN2 545 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 DDI1Q8WTU0 396 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 SYN2Q92777 582 aaPredicted RBP19.94■□□□□ 0.78
RTN4-207ENST00000402434 PGAP3Q96FM1 320 aaPredicted RBP19.94■□□□□ 0.78
RTN4-207ENST00000402434 BTN2A3PQ96KV6 586 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 DDX50Q9BQ39 737 aaKnown RBP19.94■□□□□ 0.78
RTN4-207ENST00000402434 C11orf70Q9BRQ4 267 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 FAM126AQ9BYI3 521 aaPredicted RBP19.94■□□□□ 0.78
RTN4-207ENST00000402434 SLC2A11Q9BYW1 496 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 ADAM33Q9BZ11 813 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 NUCKS1Q9H1E3 243 aaKnown RBP19.94■□□□□ 0.78
RTN4-207ENST00000402434 FAM204AQ9H8W3 233 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 TMEM51Q9NW97 253 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 CALCOCO1Q9P1Z2 691 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 STAP1Q9ULZ2 295 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 CAPN11Q9UMQ6 739 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 STARD13Q9Y3M8 1113 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 ITIH6Q6UXX5 1313 aa19.94■□□□□ 0.78
RTN4-207ENST00000402434 GOLGA6L7A0A1B0GV03 622 aa19.93■□□□□ 0.78
RTN4-207ENST00000402434 GOLGA8SH3BPF8 625 aa19.93■□□□□ 0.78
RTN4-207ENST00000402434 K7ESF4 209 aa19.93■□□□□ 0.78
RTN4-207ENST00000402434 TSPAN3O60637 253 aa19.93■□□□□ 0.78
RTN4-207ENST00000402434 APOEP02649 317 aa19.93■□□□□ 0.78
RTN4-207ENST00000402434 CCR1P32246 355 aa19.93■□□□□ 0.78
RTN4-207ENST00000402434 FLT3P36888 993 aa19.93■□□□□ 0.78
RTN4-207ENST00000402434 NBL1P41271 181 aa19.93■□□□□ 0.78
RTN4-207ENST00000402434 SLC25A52Q3SY17 297 aa19.93■□□□□ 0.78
RTN4-207ENST00000402434 C2orf27AQ580R0 203 aa19.93■□□□□ 0.78
RTN4-207ENST00000402434 OTUD1Q5VV17 481 aaPredicted RBP19.93■□□□□ 0.78
RTN4-207ENST00000402434 TRNP1Q6NT89 227 aa19.93■□□□□ 0.78
RTN4-207ENST00000402434 TSSK4Q6SA08 328 aa19.93■□□□□ 0.78
RTN4-207ENST00000402434 MON1BQ7L1V2 547 aa19.93■□□□□ 0.78
RTN4-207ENST00000402434 SYT13Q7L8C5 426 aa19.93■□□□□ 0.78
RTN4-207ENST00000402434 ACDQ96AP0 544 aa19.93■□□□□ 0.78
RTN4-207ENST00000402434 HAUS4Q9H6D7 363 aa19.93■□□□□ 0.78
RTN4-207ENST00000402434 SEPT11Q9NVA2 429 aaKnown RBP19.93■□□□□ 0.78
RTN4-207ENST00000402434 ADAM22Q9P0K1 906 aa19.93■□□□□ 0.78
RTN4-207ENST00000402434 XPO7Q9UIA9 1087 aaKnown RBP19.93■□□□□ 0.78
RTN4-207ENST00000402434 CLEC4EQ9ULY5 219 aa19.93■□□□□ 0.78
RTN4-207ENST00000402434 M0QYT0 321 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 CBFA2T2O43439 604 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 TNFAIP3P21580 790 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 PLA2G5P39877 138 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 ZBED6P86452 979 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 C1QBPQ07021 282 aaKnown RBP19.92■□□□□ 0.78
RTN4-207ENST00000402434 HSF5Q4G112 596 aaPredicted RBP19.92■□□□□ 0.78
RTN4-207ENST00000402434 EMC10Q5UCC4 262 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 ACAD10Q6JQN1 1059 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 RFWD3Q6PCD5 774 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 ZNF571Q7Z3V5 609 aaPredicted RBP19.92■□□□□ 0.78
RTN4-207ENST00000402434 BNIPLQ7Z465 357 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 ZBTB44Q8NCP5 570 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 FAM86C1Q9NVL1 165 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 FANCMQ8IYD8 2048 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 PRRT4C9JH25 899 aa19.92■□□□□ 0.78
RTN4-207ENST00000402434 F9P00740 461 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms