RNA–Protein interactions for RNA: ENST00000400301.5

USP48-204, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 1 (best) BASIC

Gene USP48, Length 4,309 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-204ENST00000400301 PSMB4P28070 264 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 MBTD1Q05BQ5 628 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 NSUN2Q08J23 767 aaKnown RBP eCLIP19.06■□□□□ 0.64
USP48-204ENST00000400301 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.06■□□□□ 0.64
USP48-204ENST00000400301 C6orf89Q6UWU4 347 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 TDRPQ86YL5 185 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 MECRQ9BV79 373 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 ULBP1Q9BZM6 244 aa19.06■□□□□ 0.64
USP48-204ENST00000400301 A8MUI8 341 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 ERVK-10P10266 1014 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 NUDT2P50583 147 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 OGDHQ02218 1023 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 PDCD2Q16342 344 aaPredicted RBP19.05■□□□□ 0.64
USP48-204ENST00000400301 SLC35B2Q8TB61 432 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 URGCPQ8TCY9 931 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 SLC44A1Q8WWI5 657 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 USP6NLQ92738 828 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 KCNK4Q9NYG8 393 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 ARAP2Q8WZ64 1704 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 TCEA3O75764 348 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 ACADSP16219 412 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 TCN1P20061 433 aaPredicted RBP19.05■□□□□ 0.64
USP48-204ENST00000400301 GRM5P41594 1212 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 ABCG1P45844 678 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 LHX1P48742 406 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 FSTL1Q12841 308 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 HABP4Q5JVS0 413 aaKnown RBP19.05■□□□□ 0.64
USP48-204ENST00000400301 EMC10Q5UCC4 262 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 HASPINQ8TF76 798 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 FZD8Q9H461 694 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 PRDM12Q9H4Q4 367 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 PDZD7Q9H5P4 517 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 FAM155BO75949 473 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 ASMTLO95671 621 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 ODC1P11926 461 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 IL1R2P27930 398 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 SERPINB5P36952 375 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 GBE1Q04446 702 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 KPNB1Q14974 876 aaKnown RBP19.05■□□□□ 0.64
USP48-204ENST00000400301 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.05■□□□□ 0.64
USP48-204ENST00000400301 RABGEF1Q9UJ41 708 aa19.05■□□□□ 0.64
USP48-204ENST00000400301 TYW5A2RUC4 315 aaKnown RBP19.04■□□□□ 0.64
USP48-204ENST00000400301 RGS20O76081 388 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 APOA4P06727 396 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 CDC25CP30307 473 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 NOS2P35228 1153 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 PMF1Q6P1K2 205 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 ADGRD1Q6QNK2 874 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 POTEAQ6S8J7 498 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 KYAT3Q6YP21 454 aaKnown RBP19.04■□□□□ 0.64
USP48-204ENST00000400301 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.04■□□□□ 0.64
USP48-204ENST00000400301 C18orf25Q96B23 403 aaPredicted RBP19.04■□□□□ 0.64
USP48-204ENST00000400301 RUVBL2Q9Y230 463 aaKnown RBP19.04■□□□□ 0.64
USP48-204ENST00000400301 GOLGA8TH3BQL2 631 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 NCAM2O15394 837 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 KLRC2P26717 231 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 TRMT5Q32P41 509 aaKnown RBP19.04■□□□□ 0.64
USP48-204ENST00000400301 MAP1SQ66K74 1059 aaPredicted RBP19.04■□□□□ 0.64
USP48-204ENST00000400301 CCDC134Q9H6E4 229 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 EML4Q9HC35 981 aaKnown RBP19.04■□□□□ 0.64
USP48-204ENST00000400301 MRPL40Q9NQ50 206 aaKnown RBP19.04■□□□□ 0.64
USP48-204ENST00000400301 A0A096LPK6 155 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 CELF2O95319 508 aaKnown RBP19.04■□□□□ 0.64
USP48-204ENST00000400301 CNGA3Q16281 694 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 DDIASQ8IXT1 998 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 WNT8BQ93098 351 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 RMDN1Q96DB5 314 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 L3MBTL3Q96JM7 780 aaPredicted RBP19.04■□□□□ 0.64
USP48-204ENST00000400301 SARS2Q9NP81 518 aaKnown RBP19.04■□□□□ 0.64
USP48-204ENST00000400301 ABI2Q9NYB9 513 aaPredicted RBP19.04■□□□□ 0.64
USP48-204ENST00000400301 HMGXB4Q9UGU5 601 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 AAR2Q9Y312 384 aaKnown RBP19.04■□□□□ 0.64
USP48-204ENST00000400301 CNTNAP2Q9UHC6 1331 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 TPP1O14773 563 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 TMEM63AO94886 807 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 GFAPP14136 432 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 NRLP54845 237 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 HUNKP57058 714 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 MFSD10Q14728 455 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 MAPRE2Q15555 327 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 SLC10A6Q3KNW5 377 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 WSCD1Q658N2 575 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 C16orf89Q6UX73 402 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 RFWD2Q8NHY2 731 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 MAF1Q9H063 256 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 SUN2Q9UH99 717 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 STYXL1Q9Y6J8 313 aa19.04■□□□□ 0.64
USP48-204ENST00000400301 PARP6Q2NL67 630 aa19.03■□□□□ 0.64
USP48-204ENST00000400301 SH3PXD2AQ5TCZ1 1133 aa19.03■□□□□ 0.64
USP48-204ENST00000400301 PDPK2PQ6A1A2 396 aa19.03■□□□□ 0.64
USP48-204ENST00000400301 TRIML2Q8N7C3 387 aa19.03■□□□□ 0.64
USP48-204ENST00000400301 FGD4Q96M96 766 aa19.03■□□□□ 0.64
USP48-204ENST00000400301 MRPL1Q9BYD6 325 aaKnown RBP19.03■□□□□ 0.64
USP48-204ENST00000400301 YY1AP1Q9H869 796 aa19.03■□□□□ 0.64
USP48-204ENST00000400301 POPDC2Q9HBU9 364 aa19.03■□□□□ 0.64
USP48-204ENST00000400301 XPNPEP3Q9NQH7 507 aa19.03■□□□□ 0.64
USP48-204ENST00000400301 CHST12Q9NRB3 414 aa19.03■□□□□ 0.64
USP48-204ENST00000400301 ABT1Q9ULW3 272 aaKnown RBP19.03■□□□□ 0.64
USP48-204ENST00000400301 MEI4A8MW99 385 aa19.03■□□□□ 0.64
USP48-204ENST00000400301 FAM182AQ5T1J6 154 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms