RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 MYBPC2Q14324 1141 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 ADGRG6Q86SQ4 1221 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 C4orf19Q8IY42 314 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 CPNE9Q8IYJ1 553 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 DEPDC1BQ8WUY9 529 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 TFB1MQ8WVM0 346 aaKnown RBP17.59■□□□□ 0.41
PTPRA-205ENST00000399903 NKD2Q969F2 451 aaPredicted RBP17.59■□□□□ 0.41
PTPRA-205ENST00000399903 EME1Q96AY2 570 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 CMTM5Q96DZ9 223 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 BTBD9Q96Q07 612 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 TEX13BQ9BXU2 312 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 THAP1Q9NVV9 213 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 THEGQ9P2T0 379 aa17.59■□□□□ 0.41
PTPRA-205ENST00000399903 POLR2AP24928 1970 aaKnown RBP17.58■□□□□ 0.41
PTPRA-205ENST00000399903 SEC24DO94855 1032 aaPredicted RBP17.58■□□□□ 0.41
PTPRA-205ENST00000399903 MTTPP55157 894 aa17.58■□□□□ 0.41
PTPRA-205ENST00000399903 KRT76Q01546 638 aa17.58■□□□□ 0.41
PTPRA-205ENST00000399903 MMRN1Q13201 1228 aa17.58■□□□□ 0.41
PTPRA-205ENST00000399903 MTA1Q13330 715 aa17.58■□□□□ 0.41
PTPRA-205ENST00000399903 PLEKHA7Q6IQ23 1121 aa17.58■□□□□ 0.41
PTPRA-205ENST00000399903 TSPAN14Q8NG11 270 aa17.58■□□□□ 0.41
PTPRA-205ENST00000399903 OTUD5Q96G74 571 aa17.58■□□□□ 0.41
PTPRA-205ENST00000399903 ABHD8Q96I13 439 aa17.58■□□□□ 0.41
PTPRA-205ENST00000399903 GPRC5DQ9NZD1 345 aa17.58■□□□□ 0.41
PTPRA-205ENST00000399903 KCND2Q9NZV8 630 aa17.58■□□□□ 0.41
PTPRA-205ENST00000399903 TUBGCP4Q9UGJ1 667 aa17.58■□□□□ 0.41
PTPRA-205ENST00000399903 RBM47A0AV96 593 aaKnown RBP17.58■□□□□ 0.4
PTPRA-205ENST00000399903 H3BNX3 289 aa17.58■□□□□ 0.4
PTPRA-205ENST00000399903 STAM2O75886 525 aa17.58■□□□□ 0.4
PTPRA-205ENST00000399903 KRT38O76015 456 aa17.58■□□□□ 0.4
PTPRA-205ENST00000399903 PGK2P07205 417 aa17.58■□□□□ 0.4
PTPRA-205ENST00000399903 CSH1P0DML2 217 aa17.58■□□□□ 0.4
PTPRA-205ENST00000399903 CSH2P0DML3 217 aa17.58■□□□□ 0.4
PTPRA-205ENST00000399903 CDH2P19022 906 aaPredicted RBP17.58■□□□□ 0.4
PTPRA-205ENST00000399903 AOC1P19801 751 aa17.58■□□□□ 0.4
PTPRA-205ENST00000399903 WNT7BP56706 349 aa17.58■□□□□ 0.4
PTPRA-205ENST00000399903 TBCCQ15814 346 aa17.58■□□□□ 0.4
PTPRA-205ENST00000399903 CLVS1Q8IUQ0 354 aaPredicted RBP17.58■□□□□ 0.4
PTPRA-205ENST00000399903 UNC5BQ8IZJ1 945 aa17.58■□□□□ 0.4
PTPRA-205ENST00000399903 NUP93Q8N1F7 819 aa17.58■□□□□ 0.4
PTPRA-205ENST00000399903 SLC35B2Q8TB61 432 aa17.58■□□□□ 0.4
PTPRA-205ENST00000399903 F7P08709 466 aaPredicted RBP17.57■□□□□ 0.4
PTPRA-205ENST00000399903 CD19P15391 556 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 NR1H2P55055 460 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 SMYD1Q8NB12 490 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 ZNF516Q92618 1163 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 MOCOSQ96EN8 888 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 POLR3FQ9H1D9 316 aaPredicted RBP17.57■□□□□ 0.4
PTPRA-205ENST00000399903 ACAD9Q9H845 621 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 ELP3Q9H9T3 547 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 ARHGAP26Q9UNA1 814 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 PSMC3P17980 439 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 JAK3P52333 1124 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 GCNT1Q02742 428 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 ZBTB41Q5SVQ8 909 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 N4BP2L1Q5TBK1 243 aaPredicted RBP17.57■□□□□ 0.4
PTPRA-205ENST00000399903 NXNQ6DKJ4 435 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 CATSPERGQ6ZRH7 1159 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 TRIM50Q86XT4 487 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 MARVELD2Q8N4S9 558 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 DIS3LQ8TF46 1054 aaKnown RBP17.57■□□□□ 0.4
PTPRA-205ENST00000399903 KCNK16Q96T55 309 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 C1orf21Q9H246 121 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 INIPQ9NRY2 104 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 PSMD13Q9UNM6 376 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 BRCA2P51587 3418 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 TMEM191CA6NGB0 347 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 LRRIQ4A6NIV6 560 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 STX16-NPEPL1H3BU86 382 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 TMEM191BP0C7N4 346 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 ALOX15P16050 662 aaPredicted RBP17.57■□□□□ 0.4
PTPRA-205ENST00000399903 GTF2BQ00403 316 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 SULT2A1Q06520 285 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 TEX44Q53QW1 395 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 FASTKD5Q7L8L6 764 aaKnown RBP17.57■□□□□ 0.4
PTPRA-205ENST00000399903 BHLHE22Q8NFJ8 381 aaPredicted RBP17.57■□□□□ 0.4
PTPRA-205ENST00000399903 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.57■□□□□ 0.4
PTPRA-205ENST00000399903 ZNF778Q96MU6 729 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 PCDH18Q9HCL0 1135 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 SMYD2Q9NRG4 433 aa17.57■□□□□ 0.4
PTPRA-205ENST00000399903 RFPL1O75677 317 aa17.56■□□□□ 0.4
PTPRA-205ENST00000399903 SLC5A3P53794 718 aa17.56■□□□□ 0.4
PTPRA-205ENST00000399903 WASHC5Q12768 1159 aa17.56■□□□□ 0.4
PTPRA-205ENST00000399903 PPM1LQ5SGD2 360 aa17.56■□□□□ 0.4
PTPRA-205ENST00000399903 ACTRT2Q8TDY3 377 aa17.56■□□□□ 0.4
PTPRA-205ENST00000399903 NLRP7Q8WX94 980 aa17.56■□□□□ 0.4
PTPRA-205ENST00000399903 ZNF606Q8WXB4 792 aa17.56■□□□□ 0.4
PTPRA-205ENST00000399903 TJP2Q9UDY2 1190 aa17.56■□□□□ 0.4
PTPRA-205ENST00000399903 KCNN4O15554 427 aa17.56■□□□□ 0.4
PTPRA-205ENST00000399903 COX4I1P13073 169 aa17.56■□□□□ 0.4
PTPRA-205ENST00000399903 XRCC1P18887 633 aaPredicted RBP17.56■□□□□ 0.4
PTPRA-205ENST00000399903 RFC1P35251 1148 aaPredicted RBP17.56■□□□□ 0.4
PTPRA-205ENST00000399903 RXRGP48443 463 aa17.56■□□□□ 0.4
PTPRA-205ENST00000399903 CDO1Q16878 200 aa17.56■□□□□ 0.4
PTPRA-205ENST00000399903 CDR2LQ86X02 465 aaPredicted RBP17.56■□□□□ 0.4
PTPRA-205ENST00000399903 TMA16Q96EY4 203 aaKnown RBP17.56■□□□□ 0.4
PTPRA-205ENST00000399903 CCDC97Q96F63 343 aaPredicted RBP17.56■□□□□ 0.4
PTPRA-205ENST00000399903 MARK4Q96L34 752 aa17.56■□□□□ 0.4
PTPRA-205ENST00000399903 SIRPGQ9P1W8 387 aa17.56■□□□□ 0.4
PTPRA-205ENST00000399903 CROCCQ5TZA2 2017 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms