RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 NAB1Q13506 487 aa23.83■■□□□ 1.41
RABGGTA-202ENST00000399409 BMPR2Q13873 1038 aa23.83■■□□□ 1.41
RABGGTA-202ENST00000399409 STXBP5Q5T5C0 1151 aa23.83■■□□□ 1.41
RABGGTA-202ENST00000399409 C9orf131Q5VYM1 1079 aa23.83■■□□□ 1.41
RABGGTA-202ENST00000399409 ANKRD23Q86SG2 305 aa23.83■■□□□ 1.41
RABGGTA-202ENST00000399409 NUDCD3Q8IVD9 361 aa23.83■■□□□ 1.41
RABGGTA-202ENST00000399409 ENDOVQ8N8Q3 282 aaKnown RBP23.83■■□□□ 1.41
RABGGTA-202ENST00000399409 OXNAD1Q96HP4 312 aaPredicted RBP23.83■■□□□ 1.41
RABGGTA-202ENST00000399409 CXorf56Q9H5V9 222 aa23.83■■□□□ 1.41
RABGGTA-202ENST00000399409 GJD2Q9UKL4 321 aa23.83■■□□□ 1.41
RABGGTA-202ENST00000399409 SPTLC1O15269 473 aa23.82■■□□□ 1.4
RABGGTA-202ENST00000399409 OPHN1O60890 802 aa23.82■■□□□ 1.4
RABGGTA-202ENST00000399409 HUS1O60921 280 aa23.82■■□□□ 1.4
RABGGTA-202ENST00000399409 ATP5BP06576 529 aaKnown RBP23.82■■□□□ 1.4
RABGGTA-202ENST00000399409 MYL2P10916 166 aa23.82■■□□□ 1.4
RABGGTA-202ENST00000399409 TMPRSS15P98073 1019 aa23.82■■□□□ 1.4
RABGGTA-202ENST00000399409 LRRC8BQ6P9F7 803 aa23.82■■□□□ 1.4
RABGGTA-202ENST00000399409 MARK2Q7KZI7 788 aaKnown RBP23.82■■□□□ 1.4
RABGGTA-202ENST00000399409 DEFB106AQ8N104 65 aa23.82■■□□□ 1.4
RABGGTA-202ENST00000399409 NDUFAF2Q8N183 169 aa23.82■■□□□ 1.4
RABGGTA-202ENST00000399409 HNRNPABQ99729 332 aaKnown RBP23.82■■□□□ 1.4
RABGGTA-202ENST00000399409 SLC13A1Q9BZW2 595 aa23.82■■□□□ 1.4
RABGGTA-202ENST00000399409 SDR42E2A6NKP2 422 aa23.82■■□□□ 1.4
RABGGTA-202ENST00000399409 RPSAP08865 295 aaKnown RBP23.82■■□□□ 1.4
RABGGTA-202ENST00000399409 VAV1P15498 845 aa23.82■■□□□ 1.4
RABGGTA-202ENST00000399409 WARSP23381 471 aaKnown RBP23.82■■□□□ 1.4
RABGGTA-202ENST00000399409 DENND5BQ6ZUT9 1274 aa23.82■■□□□ 1.4
RABGGTA-202ENST00000399409 ACMSDQ8TDX5 336 aa23.82■■□□□ 1.4
RABGGTA-202ENST00000399409 MS4A4AQ96JQ5 239 aa23.82■■□□□ 1.4
RABGGTA-202ENST00000399409 MAGEB5Q9BZ81 275 aa23.82■■□□□ 1.4
RABGGTA-202ENST00000399409 CCL15-CCL14A0A0B4J2E2 113 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 F2P00734 622 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 FAM163BP0C2L3 166 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 BST1Q10588 318 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 CCL15Q16663 113 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 PLEKHH3Q7Z736 793 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 ADGRF2Q8IZF7 708 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 TOP6BLQ8N6T0 577 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 DUSP16Q9BY84 665 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 ARHGEF4Q9NR80 690 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 PCMTD2Q9NV79 361 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 PIN4Q9Y237 131 aaKnown RBP23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 HMX2A2RU54 273 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 GNAZP19086 355 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 GLUD2P49448 558 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 OCRLQ01968 901 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 MROH9Q5TGP6 573 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 KYAT3Q6YP21 454 aaKnown RBP23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 GPATCH11Q8N954 259 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 COLGALT1Q8NBJ5 622 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 CDKL2Q92772 493 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 NUDCD1Q96RS6 583 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 MIPEPQ99797 713 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 NAT9Q9BTE0 207 aa23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 CADM1Q9BY67 442 aaKnown RBP23.81■■□□□ 1.4
RABGGTA-202ENST00000399409 FCHO1O14526 889 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 BPGMP07738 259 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 NOS2P35228 1153 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 GRIA1P42261 906 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 PDK1Q15118 436 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 CHI3L2Q15782 390 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 PIGZQ86VD9 579 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 FAM131BQ86XD5 332 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 PYROXD2Q8N2H3 581 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 MAB21L3Q8N8X9 362 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 STKLD1Q8NE28 680 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 FBXO6Q9NRD1 293 aaPredicted RBP23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 FAM237BA0A1B0GVD1 139 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 ESRRAP11474 423 aaPredicted RBP23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 CLNS1AP54105 237 aaKnown RBP23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 TEX44Q53QW1 395 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 CRLF3Q8IUI8 442 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 B3GALNT2Q8NCR0 500 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 KCTD13Q8WZ19 329 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 NT5C3BQ969T7 300 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 MECRQ9BV79 373 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 WWP1Q9H0M0 922 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 DENND2DQ9H6A0 471 aaPredicted RBP23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 BATF3Q9NR55 127 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 KLK14Q9P0G3 267 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 NKX1-2Q9UD57 310 aaPredicted RBP23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 STAP1Q9ULZ2 295 aa23.8■■□□□ 1.4
RABGGTA-202ENST00000399409 WDR27A2RRH5 827 aa23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 GYG2O15488 501 aa23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 DYNC1LI2O43237 492 aaPredicted RBP23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 PGAM1P18669 254 aa23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 ADIGQ0VDE8 80 aa23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 SNX17Q15036 470 aa23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 ZNF618Q5T7W0 954 aa23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 BNIPLQ7Z465 357 aa23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 RNF139Q8WU17 664 aa23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 FAM149B1Q96BN6 582 aa23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 MFHAS1Q9Y4C4 1052 aa23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 RNF103O00237 685 aa23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 GSC2O15499 205 aa23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 MFSD11O43934 449 aa23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 SNNO75324 88 aaPredicted RBP23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 TPBGLP0DKB5 382 aa23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 TKTP29401 623 aaKnown RBP23.79■■□□□ 1.4
RABGGTA-202ENST00000399409 NIPAL4Q0D2K0 466 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms