RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 FAM47CQ5HY64 1035 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 SCYL2Q6P3W7 929 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 RSBN1LQ6PCB5 846 aaPredicted RBP14.41□□□□□ -0.1
APOB-202ENST00000399256 ABHD15Q6UXT9 468 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 CYP4V2Q6ZWL3 525 aaPredicted RBP14.41□□□□□ -0.1
APOB-202ENST00000399256 ZNF534Q76KX8 674 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 E9PBE3 544 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 KLHL41O60662 606 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 DNAJA2O60884 412 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 KRT19P08727 400 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 CD1EP15812 388 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 SERPINB9P50453 376 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 BCAR1P56945 870 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 CRADDP78560 199 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 PDE1CQ14123 709 aaPredicted RBP14.41□□□□□ -0.1
APOB-202ENST00000399256 CNGA3Q16281 694 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 DUOXA2Q1HG44 320 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 IYDQ6PHW0 289 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 TRIM74Q86UV6 250 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 TRIM73Q86UV7 250 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 FRMD8Q9BZ67 464 aaPredicted RBP14.41□□□□□ -0.1
APOB-202ENST00000399256 PIH1D1Q9NWS0 290 aaKnown RBP14.41□□□□□ -0.1
APOB-202ENST00000399256 HMGXB4Q9UGU5 601 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 WDR46O15213 610 aaKnown RBP14.41□□□□□ -0.1
APOB-202ENST00000399256 AP1G1O43747 822 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 PEX1O43933 1283 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 PLIN3O60664 434 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 ALDOAP04075 364 aaKnown RBP14.41□□□□□ -0.1
APOB-202ENST00000399256 SERPINE1P05121 402 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 ASNSP08243 561 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 COX4I1P13073 169 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 HPCAP84074 193 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 TRNP1Q6NT89 227 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 PQLC1Q8N2U9 271 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 MARVELD2Q8N4S9 558 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 LHX5Q9H2C1 402 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 RNPEPQ9H4A4 650 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 STN1Q9H668 368 aaKnown RBP14.41□□□□□ -0.1
APOB-202ENST00000399256 RNF146Q9NTX7 359 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 PCDHA11Q9Y5I1 949 aa14.41□□□□□ -0.1
APOB-202ENST00000399256 MED7O43513 233 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 ZBTB14O43829 449 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 CRTAMO95727 393 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 MTTPP55157 894 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 MYLK3Q32MK0 819 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 CASC4Q6P4E1 433 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 SLC4A11Q8NBS3 891 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 AGR3Q8TD06 166 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 PIWIL1Q96J94 861 aaKnown RBP14.4□□□□□ -0.1
APOB-202ENST00000399256 TWNKQ96RR1 684 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 GMLQ99445 158 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 OXCT2Q9BYC2 517 aaPredicted RBP14.4□□□□□ -0.1
APOB-202ENST00000399256 DNAJC28Q9NX36 388 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 MAP3K20Q9NYL2 800 aaKnown RBP14.4□□□□□ -0.1
APOB-202ENST00000399256 LTBP3Q9NS15 1303 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 M0QYV0 167 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 APOL1O14791 398 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 ADCY6O43306 1168 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 PRPSAP2O60256 369 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 ENDOD1O94919 500 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 MSX2P35548 267 aaPredicted RBP14.4□□□□□ -0.1
APOB-202ENST00000399256 ARL2P36404 184 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 CAPSQ13938 189 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 PPM1JQ5JR12 505 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 PQLC3Q8N755 202 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 ZFP28Q8NHY6 868 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 UBA3Q8TBC4 463 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 RXFP2Q8WXD0 754 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 SLC7A3Q8WY07 619 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 XYLT2Q9H1B5 865 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 DHX33Q9H6R0 707 aaKnown RBP14.4□□□□□ -0.1
APOB-202ENST00000399256 XPNPEP3Q9NQH7 507 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 ARHGAP26Q9UNA1 814 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 NR2E3Q9Y5X4 410 aa14.4□□□□□ -0.1
APOB-202ENST00000399256 WDR27A2RRH5 827 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 ZNF195O14628 629 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 GLRA3O75311 464 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 CSDE1O75534 798 aaKnown RBP14.39□□□□□ -0.11
APOB-202ENST00000399256 MICAL2O94851 1124 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 SUPT20HL2P0C7V6 817 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 ATXN3P54252 364 aaPredicted RBP14.39□□□□□ -0.11
APOB-202ENST00000399256 SUPT20HL1Q3ZLR7 823 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 TMEM259Q4ZIN3 620 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 PRPF18Q99633 342 aaKnown RBP14.39□□□□□ -0.11
APOB-202ENST00000399256 PSMD13Q9UNM6 376 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 AP4B1Q9Y6B7 739 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 AIM2O14862 343 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 DENRO43583 198 aaKnown RBP14.39□□□□□ -0.11
APOB-202ENST00000399256 FAM189A1O60320 539 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 SRGAP2CP0DJJ0 459 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 SRGAP2BP0DMP2 458 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 PDGFRAP16234 1089 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 GPD1P21695 349 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 IL4RP24394 825 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 ZNF143P52747 638 aaPredicted RBP14.39□□□□□ -0.11
APOB-202ENST00000399256 AP3M2P53677 418 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 RPL26P61254 145 aaKnown RBP14.39□□□□□ -0.11
APOB-202ENST00000399256 MRPS22P82650 360 aaKnown RBP14.39□□□□□ -0.11
APOB-202ENST00000399256 SH2D4BQ5SQS7 431 aa14.39□□□□□ -0.11
APOB-202ENST00000399256 TIFABQ6ZNK6 161 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms