RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 TKTL1P51854 596 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 MAP3K7CLP57077 242 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 DEUP1Q05D60 604 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 NLRP9Q7RTR0 991 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 COLGALT1Q8NBJ5 622 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 WNT8BQ93098 351 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 SLC2A13Q96QE2 648 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 TRIM55Q9BYV6 548 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 KRT82Q9NSB4 513 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 TRIM33Q9UPN9 1127 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 NR2E3Q9Y5X4 410 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 CREB3O43889 395 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 RARBP10826 455 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 MLNP12872 115 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 SERPINB4P48594 390 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 GLUD2P49448 558 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 AP1B1Q10567 949 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 OVGP1Q12889 678 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 NME3Q13232 169 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 PRKD1Q15139 912 aaPredicted RBP14.29□□□□□ -0.12
PRAME-202ENST00000398743 SPDYAQ5MJ70 313 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 SYPL2Q5VXT5 272 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 TRMT10BQ6PF06 316 aaKnown RBP14.29□□□□□ -0.12
PRAME-202ENST00000398743 SENP8Q96LD8 212 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 APBA2Q99767 749 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 TRIM56Q9BRZ2 755 aaKnown RBP14.29□□□□□ -0.12
PRAME-202ENST00000398743 TMPRSS4Q9NRS4 437 aa14.29□□□□□ -0.12
PRAME-202ENST00000398743 RNF103O00237 685 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 CAPN9O14815 690 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 PPP1R12AO14974 1030 aaPredicted RBP14.28□□□□□ -0.12
PRAME-202ENST00000398743 OPHN1O60890 802 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 RFPL1O75677 317 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 FBXO21O94952 628 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 TARSP26639 723 aaKnown RBP14.28□□□□□ -0.12
PRAME-202ENST00000398743 MLH1P40692 756 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 LHX1P48742 406 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 GTF2A1P52655 376 aaPredicted RBP14.28□□□□□ -0.12
PRAME-202ENST00000398743 MRPS6P82932 125 aaKnown RBP14.28□□□□□ -0.12
PRAME-202ENST00000398743 PDK1Q15118 436 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 NBPF20Q3BBV1 942 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 PLEKHG4Q58EX7 1191 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 KIAA0319Q5VV43 1072 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 CDHR3Q6ZTQ4 885 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 TMEM86AQ8N2M4 240 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 DEPDC1BQ8WUY9 529 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 STAMBPL1Q96FJ0 436 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 P2RY11Q96G91 374 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 RAB3IPQ96QF0 476 aaPredicted RBP14.28□□□□□ -0.12
PRAME-202ENST00000398743 CRTAC1Q9NQ79 661 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 EIF2B3Q9NR50 452 aaKnown RBP14.28□□□□□ -0.12
PRAME-202ENST00000398743 PIGVQ9NUD9 493 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 FAM105AQ9NUU6 356 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 MKS1Q9NXB0 559 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 DCTN4Q9UJW0 460 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 STK38LQ9Y2H1 464 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 CDY2AQ9Y6F7 541 aa14.28□□□□□ -0.12
PRAME-202ENST00000398743 MEIS3P2A8K0S8 358 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 EEF2KO00418 725 aaKnown RBP14.27□□□□□ -0.12
PRAME-202ENST00000398743 UGT1A9O60656 530 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 TGDSO95455 350 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 AKR1A1P14550 325 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 BGNP21810 368 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 CCNFP41002 786 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 SERPINB9P50453 376 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 AIF1P55008 147 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 HUNKP57058 714 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 BMPR2Q13873 1038 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 LRRC8BQ6P9F7 803 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 HFE2Q6ZVN8 426 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 CYS1Q717R9 158 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 CCNYQ8ND76 341 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 SOCS4Q8WXH5 440 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 SLC9A7Q96T83 725 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 SYT15Q9BQS2 421 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 LRMDAQ9H2I8 198 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 UGT1A7Q9HAW7 530 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 UGT1A10Q9HAW8 530 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 UGT1A8Q9HAW9 530 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 CACNG4Q9UBN1 327 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 ZFP69BQ9UJL9 534 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 PLLPQ9Y342 182 aa14.27□□□□□ -0.12
PRAME-202ENST00000398743 F5H423 210 aaPredicted RBP14.27□□□□□ -0.13
PRAME-202ENST00000398743 KLF11O14901 512 aa14.27□□□□□ -0.13
PRAME-202ENST00000398743 AP1G2O75843 785 aa14.27□□□□□ -0.13
PRAME-202ENST00000398743 IL1BP01584 269 aa14.27□□□□□ -0.13
PRAME-202ENST00000398743 THP07101 528 aa14.27□□□□□ -0.13
PRAME-202ENST00000398743 C6orf222P0C671 652 aaPredicted RBP14.27□□□□□ -0.13
PRAME-202ENST00000398743 IGFBP6P24592 240 aaPredicted RBP14.27□□□□□ -0.13
PRAME-202ENST00000398743 RASSF2P50749 326 aa14.27□□□□□ -0.13
PRAME-202ENST00000398743 DPYSQ14117 519 aa14.27□□□□□ -0.13
PRAME-202ENST00000398743 PAFAH1B3Q15102 231 aaKnown RBP14.27□□□□□ -0.13
PRAME-202ENST00000398743 TAF1BQ53T94 588 aaPredicted RBP14.27□□□□□ -0.13
PRAME-202ENST00000398743 CASC4Q6P4E1 433 aa14.27□□□□□ -0.13
PRAME-202ENST00000398743 RFX8Q6ZV50 586 aa14.27□□□□□ -0.13
PRAME-202ENST00000398743 CEP57Q86XR8 500 aa14.27□□□□□ -0.13
PRAME-202ENST00000398743 PDCD7Q8N8D1 485 aaKnown RBP14.27□□□□□ -0.13
PRAME-202ENST00000398743 GSTCDQ8NEC7 633 aa14.27□□□□□ -0.13
PRAME-202ENST00000398743 RFWD2Q8NHY2 731 aa14.27□□□□□ -0.13
PRAME-202ENST00000398743 SLC7A14Q8TBB6 771 aa14.27□□□□□ -0.13
PRAME-202ENST00000398743 INPP5DQ92835 1189 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms