RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 PRR5LQ6MZQ0 368 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 SEZ6L2Q6UXD5 910 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 VASH1Q7L8A9 365 aaPredicted RBP6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 ZBTB46Q86UZ6 589 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 ZNF677Q86XU0 584 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 ZNF321PQ8N8H1 164 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 FBXO27Q8NI29 283 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 CEP76Q8TAP6 659 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 SLC26A7Q8TE54 656 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 ADAMTS18Q8TE60 1221 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 ZNF566Q969W8 418 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 PBKQ96KB5 322 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 LRGUKQ96M69 825 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 SLC2A13Q96QE2 648 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 SETDB2Q96T68 719 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 OCEL1Q9H607 264 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 OR6C2Q9NZP2 312 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 SAMD15Q9P1V8 674 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 ANKRD34BA5PLL1 514 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 RBAK-RBAKDNI3L0D1 243 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 AXIN1O15169 862 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 CIDEAO60543 219 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 PPP1R37O75864 691 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 KLHL18O94889 574 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 GAS8O95995 478 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 EGFRP00533 1210 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 SLC26A3P40879 764 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 POLE2P56282 527 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 MRPS25P82663 173 aaKnown RBP6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 EHHADHQ08426 723 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 GRB10Q13322 594 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 HERC3Q15034 1050 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 SGSM1Q2NKQ1 1148 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 CRY2Q49AN0 593 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 METTL21CQ5VZV1 264 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 SLC30A6Q6NXT4 461 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 MACC1Q6ZN28 852 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 EIF1ADQ8N9N8 165 aaKnown RBP6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 TSEN2Q8NCE0 465 aaKnown RBP6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 FANK1Q8TC84 345 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 CLP1Q92989 425 aaKnown RBP6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 VCPIP1Q96JH7 1222 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 IFT74Q96LB3 600 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 TUBGCP5Q96RT8 1024 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 CRB3Q9BUF7 120 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 STK33Q9BYT3 514 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 ARMC1Q9NVT9 282 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 COX16Q9P0S2 106 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 PSME2Q9UL46 239 aa6.8□□□□□ -1.32
TM9SF4-202ENST00000398022 A8MX80 341 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 MATN2O00339 956 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 PIGNO95427 931 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 FTCDO95954 541 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 POLBP06746 335 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 HSMCR30P0CW71 290 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 APEHP13798 732 aaKnown RBP6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 CHN1P15882 459 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 CARSP49589 748 aaKnown RBP6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 ATXN1P54253 815 aaKnown RBP6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 RPP30P78346 268 aaKnown RBP6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 BMPR2Q13873 1038 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 FAM47CQ5HY64 1035 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 LRIG3Q6UXM1 1119 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 SLC30A10Q6XR72 485 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 LPCAT1Q8NF37 534 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 OR10Z1Q8NGY1 313 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 ASZ1Q8WWH4 475 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 CEP170P1Q96L14 293 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 CCDC28BQ9BUN5 200 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 SLITRK6Q9H5Y7 841 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 OLA1Q9NTK5 396 aaKnown RBP6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 PANK4Q9NVE7 773 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 SALL4Q9UJQ4 1053 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 TRIM33Q9UPN9 1127 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 ROBO3Q96MS0 1386 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 CES2O00748 559 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 KCNK3O14649 394 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 EPHB6O15197 1021 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 SMAD6O43541 496 aaKnown RBP6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 SLC22A3O75751 556 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 YBEYP58557 167 aaPredicted RBP6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 UBE2IP63279 158 aaKnown RBP6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 SPARCL1Q14515 664 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 SGO2Q562F6 1265 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 TTMPQ5BVD1 217 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 LRRC55Q6ZSA7 311 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 CEP97Q8IW35 865 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 MAPKAPK5Q8IW41 473 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 KLHL7Q8IXQ5 586 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 IQCKQ8N0W5 287 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 DENND6BQ8NEG7 585 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 HUS1BQ8NHY5 278 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 EPS8L1Q8TE68 723 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 SH3RF3Q8TEJ3 882 aaPredicted RBP6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 SLC22A18Q96BI1 424 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 TAF1DQ9H5J8 278 aaPredicted RBP6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 FBRSQ9HAH7 460 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 POLR3BQ9NW08 1133 aaPredicted RBP6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 SMARCAL1Q9NZC9 954 aa6.79□□□□□ -1.32
TM9SF4-202ENST00000398022 EXTL2Q9UBQ6 330 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms