RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 SNRPAP09012 282 aaKnown RBP18.95■□□□□ 0.62
CHRFAM7A-202ENST00000397827 RANBP1P43487 201 aa18.95■□□□□ 0.62
CHRFAM7A-202ENST00000397827 SERPINB4P48594 390 aa18.95■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ADIGQ0VDE8 80 aa18.95■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ARRDC4Q8NCT1 418 aa18.95■□□□□ 0.62
CHRFAM7A-202ENST00000397827 B4GALNT2Q8NHY0 566 aa18.95■□□□□ 0.62
CHRFAM7A-202ENST00000397827 TRIM55Q9BYV6 548 aa18.95■□□□□ 0.62
CHRFAM7A-202ENST00000397827 CEP41Q9BYV8 373 aa18.95■□□□□ 0.62
CHRFAM7A-202ENST00000397827 COQ9O75208 318 aa18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 BEST1O76090 585 aa18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 CD4P01730 458 aa18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 VAV1P15498 845 aa18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 CRADDP78560 199 aa18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 DCAF6Q58WW2 860 aa18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 CLNKQ7Z7G1 428 aa18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 OSTM1Q86WC4 334 aa18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 UNC5BQ8IZJ1 945 aa18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 MCUQ8NE86 351 aa18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 PTPN18Q99952 460 aa18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ZCWPW1Q9H0M4 648 aa18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 CACNG4Q9UBN1 327 aa18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 SMIM24O75264 130 aa18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ATP5HO75947 161 aa18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 MAGEA3P43357 314 aa18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 TAF6P49848 677 aa18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 SULT1E1P49888 294 aa18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 PRKD1Q15139 912 aaPredicted RBP18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 MROH9Q5TGP6 573 aa18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ADGRF2Q8IZF7 708 aa18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 QKIQ96PU8 341 aaKnown RBP eCLIP18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 EBNA1BP2Q99848 306 aaKnown RBP18.94■□□□□ 0.62
CHRFAM7A-202ENST00000397827 MBLAC1A4D2B0 266 aaPredicted RBP18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 DCAF8L1A6NGE4 600 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 A6NHS1 94 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 RFPL1O75677 317 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ZFXP17010 805 aaPredicted RBP18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 NR2C2P49116 596 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 NDUFV1P49821 464 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 RABGGTBP53611 331 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 MRPS5P82675 430 aaKnown RBP18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 MFSD10Q14728 455 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 UBXN11Q5T124 520 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 CHSY1Q86X52 802 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ZFATQ9P243 1243 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 HEY2Q9UBP5 337 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 SLC45A1Q9Y2W3 748 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 USP3Q9Y6I4 520 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ZNF638Q14966 1978 aaKnown RBP18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ZNF487B1APH4 448 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 TRDMT1O14717 391 aaKnown RBP18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 HUS1O60921 280 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 MATKP42679 507 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 RPL34P49207 117 aaKnown RBP18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ROR2Q01974 943 aaKnown RBP18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 USP4Q13107 963 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 SMAD1Q15797 465 aaKnown RBP18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ANKRD23Q86SG2 305 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 B3GALNT2Q8NCR0 500 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 GSDMBQ8TAX9 411 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 HTR3CQ8WXA8 447 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 PRR11Q96HE9 360 aaPredicted RBP18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ZNF560Q96MR9 790 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 RAB3IPQ96QF0 476 aaPredicted RBP18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 EPAS1Q99814 870 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 TBC1D10AQ9BXI6 508 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 KCNK13Q9HB14 408 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 FBXO6Q9NRD1 293 aaPredicted RBP18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 GDAP2Q9NXN4 497 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ZNF180Q9UJW8 692 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 HMX2A2RU54 273 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 CYB561D2O14569 222 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 MFSD11O43934 449 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 TOP3BO95985 862 aaKnown RBP18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 EPHB2P29323 1055 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ARL4AP40617 200 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ABL2P42684 1182 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 LILRA4P59901 499 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 CDC42EP1Q00587 391 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 CBLBQ13191 982 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 CTC1Q2NKJ3 1217 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ANKRD20A2Q5SQ80 823 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ANKRD20A1Q5TYW2 823 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ANKRD20A3Q5VUR7 823 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 OLFML2BQ68BL8 750 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 TLK2Q86UE8 772 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 TFB1MQ8WVM0 346 aaKnown RBP18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 HSFY1Q96LI6 401 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 CHCHD3Q9NX63 227 aaKnown RBP18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 SLC17A6Q9P2U8 582 aa18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 GNEQ9Y223 722 aaKnown RBP18.93■□□□□ 0.62
CHRFAM7A-202ENST00000397827 LIN7AO14910 233 aaPredicted RBP18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 TPSB2P20231 275 aa18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ACADSBP45954 432 aa18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ARFIP2P53365 341 aa18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 TPSAB1Q15661 275 aa18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 CASC4Q6P4E1 433 aa18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 STRADAQ7RTN6 431 aa18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ZNF398Q8TD17 642 aa18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 LRRC39Q96DD0 335 aa18.92■□□□□ 0.62
CHRFAM7A-202ENST00000397827 ZFP42Q96MM3 310 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms