RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 GAREM2Q75VX8 874 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 FAM90A1Q86YD7 464 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 RTL3Q8N8U3 475 aaKnown RBP7.1□□□□□ -1.27
SMCO1-201ENST00000397537 POC5Q8NA72 575 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 OR56B2PQ8NGI1 322 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 NOC3LQ8WTT2 800 aaKnown RBP7.1□□□□□ -1.27
SMCO1-201ENST00000397537 NAA11Q9BSU3 229 aaPredicted RBP7.1□□□□□ -1.27
SMCO1-201ENST00000397537 HTATIP2Q9BUP3 242 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 TRIM7Q9C029 511 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 IL1RAPL2Q9NP60 686 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 HEYLQ9NQ87 328 aaPredicted RBP7.1□□□□□ -1.27
SMCO1-201ENST00000397537 RAD18Q9NS91 495 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 POLR3BQ9NW08 1133 aaPredicted RBP7.1□□□□□ -1.27
SMCO1-201ENST00000397537 CNOT7Q9UIV1 285 aaKnown RBP7.1□□□□□ -1.27
SMCO1-201ENST00000397537 USP18Q9UMW8 372 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 TRAF3IP3Q9Y228 551 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 ASB3Q9Y575 518 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 C1orf167Q5SNV9 1468 aa7.1□□□□□ -1.27
SMCO1-201ENST00000397537 RPRD2Q5VT52 1461 aaKnown RBP7.1□□□□□ -1.27
SMCO1-201ENST00000397537 ZNF804BA4D1E1 1349 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 C7orf72A4D263 438 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 FAM90A20PA6NIJ5 464 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 FAM171A2A8MVW0 826 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 PPP6R2O75170 966 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 OR2C1O95371 312 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 TUBBP07437 444 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 BMP2P12643 396 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 ARF4P18085 180 aaPredicted RBP7.09□□□□□ -1.27
SMCO1-201ENST00000397537 ADSSP30520 456 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 SOX6P35712 828 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 DIO1P49895 249 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 NPY4RP50391 375 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 ZNF81P51508 661 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 GMFBP60983 142 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 RPL11P62913 178 aaKnown RBP7.09□□□□□ -1.27
SMCO1-201ENST00000397537 TRA2BP62995 288 aaKnown RBP7.09□□□□□ -1.27
SMCO1-201ENST00000397537 SARNPP82979 210 aaKnown RBP7.09□□□□□ -1.27
SMCO1-201ENST00000397537 DEUP1Q05D60 604 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 PDCLQ13371 301 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 CAPSQ13938 189 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 GAS6Q14393 721 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 MXD4Q14582 209 aaPredicted RBP7.09□□□□□ -1.27
SMCO1-201ENST00000397537 TRIM60Q495X7 471 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 ZNF484Q5JVG2 852 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 LINC00696Q6ZRV3 163 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 ADCK1Q86TW2 530 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 ZNF598Q86UK7 904 aaKnown RBP7.09□□□□□ -1.27
SMCO1-201ENST00000397537 TAX1BP1Q86VP1 789 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 DNAAF5Q86Y56 855 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 CILP2Q8IUL8 1156 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 IL22RA1Q8N6P7 574 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 FAM181AQ8N9Y4 354 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 SETD6Q8TBK2 473 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 IFI44Q8TCB0 444 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 HOXB13Q92826 284 aaPredicted RBP7.09□□□□□ -1.27
SMCO1-201ENST00000397537 FAM111AQ96PZ2 611 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 MIPEPQ99797 713 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 SLC39A3Q9BRY0 314 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 TUBB6Q9BUF5 446 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 PACSIN1Q9BY11 444 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 NELFAQ9H3P2 528 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 HOMER3Q9NSC5 361 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 SLC35D1Q9NTN3 355 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 TCP11L1Q9NUJ3 509 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 SLCO3A1Q9UIG8 710 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 KCNE2Q9Y6J6 123 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 EHBP1L1Q8N3D4 1523 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 CCDC141Q6ZP82 1450 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 ADGRL3Q9HAR2 1447 aa7.09□□□□□ -1.27
SMCO1-201ENST00000397537 GLOD5A6NK44 160 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 MAGEB3O15480 346 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 DYRK3O43781 588 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 TFRCP02786 760 aaKnown RBP7.08□□□□□ -1.28
SMCO1-201ENST00000397537 GHRP10912 638 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 FDPSP14324 419 aaKnown RBP7.08□□□□□ -1.28
SMCO1-201ENST00000397537 CASP3P42574 277 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 CENPAP49450 140 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 FAM189BP81408 668 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 NSUN2Q08J23 767 aaKnown RBP eCLIP7.08□□□□□ -1.28
SMCO1-201ENST00000397537 KIF5AQ12840 1032 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 LAPTM5Q13571 262 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 PCLAFQ15004 111 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 PDK1Q15118 436 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 SLC5A9Q2M3M2 681 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 GALNTL6Q49A17 601 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.08□□□□□ -1.28
SMCO1-201ENST00000397537 TTC38Q5R3I4 469 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 EMC10Q5UCC4 262 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 PRAMEF9Q5VWM5 478 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 DSG4Q86SJ6 1040 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 SYT9Q86SS6 491 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 FAM83AQ86UY5 434 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 MAML2Q8IZL2 1156 aaPredicted RBP7.08□□□□□ -1.28
SMCO1-201ENST00000397537 HASPINQ8TF76 798 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 MAP6Q96JE9 813 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 PIP5K1AQ99755 562 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 TCF25Q9BQ70 676 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 VEZTQ9HBM0 779 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 ATP13A1Q9HD20 1204 aa7.08□□□□□ -1.28
SMCO1-201ENST00000397537 GIMAP4Q9NUV9 329 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms