RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 PCDH18Q9HCL0 1135 aa15.17■□□□□ 0.02
CCNF-202ENST00000397066 FZD1Q9UP38 647 aa15.17■□□□□ 0.02
CCNF-202ENST00000397066 INPP5FQ9Y2H2 1132 aa15.17■□□□□ 0.02
CCNF-202ENST00000397066 SCN9AQ15858 1988 aa15.17■□□□□ 0.02
CCNF-202ENST00000397066 MSCO60682 206 aa15.17■□□□□ 0.02
CCNF-202ENST00000397066 GRK2P25098 689 aa15.17■□□□□ 0.02
CCNF-202ENST00000397066 TMEM132BQ14DG7 1078 aa15.17■□□□□ 0.02
CCNF-202ENST00000397066 R3HDM1Q15032 1099 aaKnown RBP15.17■□□□□ 0.02
CCNF-202ENST00000397066 CA9Q16790 459 aa15.17■□□□□ 0.02
CCNF-202ENST00000397066 PPM1JQ5JR12 505 aa15.17■□□□□ 0.02
CCNF-202ENST00000397066 EEF1DP3Q658K8 133 aa15.17■□□□□ 0.02
CCNF-202ENST00000397066 RTKN2Q8IZC4 609 aa15.17■□□□□ 0.02
CCNF-202ENST00000397066 GALNT4Q8N4A0 578 aa15.17■□□□□ 0.02
CCNF-202ENST00000397066 ZNF280CQ8ND82 737 aa15.17■□□□□ 0.02
CCNF-202ENST00000397066 PCDH19Q8TAB3 1148 aa15.17■□□□□ 0.02
CCNF-202ENST00000397066 NAT14Q8WUY8 206 aa15.17■□□□□ 0.02
CCNF-202ENST00000397066 AKT1S1Q96B36 256 aa15.17■□□□□ 0.02
CCNF-202ENST00000397066 POMPQ9Y244 141 aa15.17■□□□□ 0.02
CCNF-202ENST00000397066 SNNO75324 88 aaPredicted RBP15.16■□□□□ 0.02
CCNF-202ENST00000397066 DEUP1Q05D60 604 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 USP4Q13107 963 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 RARS2Q5T160 578 aaKnown RBP15.16■□□□□ 0.02
CCNF-202ENST00000397066 CES4AQ5XG92 561 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 MCRS1Q96EZ8 462 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 CCDC28BQ9BUN5 200 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 XYLT2Q9H1B5 865 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 CLPTM1O96005 669 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 CPA3P15088 417 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 CCNFP41002 786 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 IDH3AP50213 366 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 NDST1P52848 882 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 GBE1Q04446 702 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 ARMC3Q5W041 872 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 PIWIL1Q96J94 861 aaKnown RBP15.16■□□□□ 0.02
CCNF-202ENST00000397066 APPL1Q9UKG1 709 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 MGAT1P26572 445 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 ARL4AP40617 200 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 ALDH1A3P47895 512 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 BTKQ06187 659 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 GRM1Q13255 1194 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 CCDC14Q49A88 953 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 HSP90AA5PQ58FG0 334 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 TEDDM1Q5T9Z0 273 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 IYDQ6PHW0 289 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 TNS4Q8IZW8 715 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 NETO2Q8NC67 525 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 TRAPPC12Q8WVT3 735 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 SEPT1Q8WYJ6 367 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 ITGA11Q9UKX5 1188 aa15.16■□□□□ 0.02
CCNF-202ENST00000397066 C2CD4BA6NLJ0 364 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 COX4I1P13073 169 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 VAV1P15498 845 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 TAZQ16635 292 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 OLFML2BQ68BL8 750 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 RNF148Q8N7C7 305 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 C12orf29Q8N999 325 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 LRRC37AA6NMS7 1700 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 FAM159BA6NKW6 160 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 MAFO75444 373 aaPredicted RBP15.15■□□□□ 0.02
CCNF-202ENST00000397066 UBA1P22314 1058 aaKnown RBP15.15■□□□□ 0.02
CCNF-202ENST00000397066 PMLP29590 882 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 COG7P83436 770 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 ANKRD20A4Q4UJ75 823 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 SH2D4BQ5SQS7 431 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 JADE1Q6IE81 842 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 POTEAQ6S8J7 498 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 NCAPG2Q86XI2 1143 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 TMEM192Q8IY95 271 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 DNAAF3Q8N9W5 541 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 SIGLEC10Q96LC7 697 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 BCAP29Q9UHQ4 241 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 CDY2AQ9Y6F7 541 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 CDY1Q9Y6F8 540 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 SRCAPQ6ZRS2 3230 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 C15orf38-AP3S2A0A0A6YYH1 394 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 BCLAF3A2AJT9 711 aaKnown RBP15.15■□□□□ 0.02
CCNF-202ENST00000397066 LACTBL1A8MY62 500 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 PLIN3O60664 434 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 IL18RAPO95256 599 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 ENO3P13929 434 aaPredicted RBP15.15■□□□□ 0.02
CCNF-202ENST00000397066 MSX2P35548 267 aaPredicted RBP15.15■□□□□ 0.02
CCNF-202ENST00000397066 GPD2P43304 727 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 ABCE1P61221 599 aaKnown RBP15.15■□□□□ 0.02
CCNF-202ENST00000397066 PDE1CQ14123 709 aaPredicted RBP15.15■□□□□ 0.02
CCNF-202ENST00000397066 FLOT2Q14254 428 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 MBLAC2Q68D91 279 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 C4orf22Q6V702 233 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 PACS1Q6VY07 963 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 ARPINQ7Z6K5 226 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 FBXW8Q8N3Y1 598 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 SCYL1Q96KG9 808 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 FAM167AQ96KS9 214 aa15.15■□□□□ 0.02
CCNF-202ENST00000397066 NIFKQ9BYG3 293 aaKnown RBP15.15■□□□□ 0.02
CCNF-202ENST00000397066 DDX18Q9NVP1 670 aaKnown RBP15.15■□□□□ 0.02
CCNF-202ENST00000397066 ERVK-10P10266 1014 aa15.14■□□□□ 0.02
CCNF-202ENST00000397066 SNX16P57768 344 aa15.14■□□□□ 0.02
CCNF-202ENST00000397066 IFRD2Q12894 506 aaPredicted RBP15.14■□□□□ 0.02
CCNF-202ENST00000397066 CCNIQ14094 377 aa15.14■□□□□ 0.02
CCNF-202ENST00000397066 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.14■□□□□ 0.02
CCNF-202ENST00000397066 MCUQ8NE86 351 aa15.14■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms