RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 MARCH2Q9P0N8 246 aa11.03□□□□□ -0.64
NUP98-205ENST00000397007 XPO7Q9UIA9 1087 aaKnown RBP11.03□□□□□ -0.64
NUP98-205ENST00000397007 MAGED2Q9UNF1 606 aaPredicted RBP11.03□□□□□ -0.64
NUP98-205ENST00000397007 ZNF510Q9Y2H8 683 aa11.03□□□□□ -0.64
NUP98-205ENST00000397007 DUSP10Q9Y6W6 482 aa11.03□□□□□ -0.64
NUP98-205ENST00000397007 MSI1O43347 362 aaKnown RBP11.02□□□□□ -0.64
NUP98-205ENST00000397007 HDCP19113 662 aa11.02□□□□□ -0.64
NUP98-205ENST00000397007 PTPN7P35236 360 aa11.02□□□□□ -0.64
NUP98-205ENST00000397007 STARD6P59095 220 aa11.02□□□□□ -0.64
NUP98-205ENST00000397007 DPYSL2Q16555 572 aa11.02□□□□□ -0.64
NUP98-205ENST00000397007 C15orf59Q2T9L4 293 aaPredicted RBP11.02□□□□□ -0.64
NUP98-205ENST00000397007 LRRC38Q5VT99 294 aa11.02□□□□□ -0.64
NUP98-205ENST00000397007 RHOT2Q8IXI1 618 aa11.02□□□□□ -0.64
NUP98-205ENST00000397007 CCDC185Q8N715 623 aa11.02□□□□□ -0.64
NUP98-205ENST00000397007 DLGAP2Q9P1A6 1054 aa11.02□□□□□ -0.64
NUP98-205ENST00000397007 SRFP11831 508 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 EIF2DP41214 584 aaKnown RBP11.02□□□□□ -0.65
NUP98-205ENST00000397007 DPYSQ14117 519 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 TXNRD3NBQ6F5E7 133 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 RHBDF2Q6PJF5 856 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 SPC24Q8NBT2 197 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 CCDC42Q96M95 316 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 NUP85Q9BW27 656 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 HS3ST4Q9Y661 456 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 MYLKQ15746 1914 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 GRID2IPA4D2P6 1211 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 CYP17A1P05093 508 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 RALAP11233 206 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 PSMC3P17980 439 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 CTNNA2P26232 953 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 OPRD1P41143 372 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 HCAR3P49019 387 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 TNK2Q07912 1038 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 OR6B2Q6IFH4 312 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 BBS7Q8IWZ6 715 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 MSANTD3Q96H12 275 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 FAM50BQ9Y247 325 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 SLC27A6Q9Y2P4 619 aa11.02□□□□□ -0.65
NUP98-205ENST00000397007 BDP1A6H8Y1 2624 aa11.01□□□□□ -0.65
NUP98-205ENST00000397007 CACNG3O60359 315 aa11.01□□□□□ -0.65
NUP98-205ENST00000397007 NCAM1P13591 858 aa11.01□□□□□ -0.65
NUP98-205ENST00000397007 HOXD9P28356 352 aaPredicted RBP11.01□□□□□ -0.65
NUP98-205ENST00000397007 CA8P35219 290 aa11.01□□□□□ -0.65
NUP98-205ENST00000397007 HS1BP3Q53T59 392 aa11.01□□□□□ -0.65
NUP98-205ENST00000397007 MAMSTRQ6ZN01 415 aa11.01□□□□□ -0.65
NUP98-205ENST00000397007 RNF135Q8IUD6 432 aa11.01□□□□□ -0.65
NUP98-205ENST00000397007 MSANTD4Q8NCY6 345 aa11.01□□□□□ -0.65
NUP98-205ENST00000397007 BPIFB1Q8TDL5 484 aa11.01□□□□□ -0.65
NUP98-205ENST00000397007 ZNF653Q96CK0 615 aa11.01□□□□□ -0.65
NUP98-205ENST00000397007 MAGEB5Q9BZ81 275 aa11.01□□□□□ -0.65
NUP98-205ENST00000397007 MRPL47Q9HD33 250 aaKnown RBP11.01□□□□□ -0.65
NUP98-205ENST00000397007 C11orf16Q9NQ32 467 aa11.01□□□□□ -0.65
NUP98-205ENST00000397007 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.01□□□□□ -0.65
NUP98-205ENST00000397007 NARSO43776 548 aaKnown RBP11.01□□□□□ -0.65
NUP98-205ENST00000397007 F9P00740 461 aa11.01□□□□□ -0.65
NUP98-205ENST00000397007 HTR7P34969 479 aa11.01□□□□□ -0.65
NUP98-205ENST00000397007 IRAK1P51617 712 aa11.01□□□□□ -0.65
NUP98-205ENST00000397007 PLCB2Q00722 1185 aa11.01□□□□□ -0.65
NUP98-205ENST00000397007 BTBD8Q5XKL5 378 aa11.01□□□□□ -0.65
NUP98-205ENST00000397007 ZNF564Q8TBZ8 553 aaPredicted RBP11.01□□□□□ -0.65
NUP98-205ENST00000397007 UBE2Q2Q8WVN8 375 aa11.01□□□□□ -0.65
NUP98-205ENST00000397007 BTN2A3PQ96KV6 586 aa11.01□□□□□ -0.65
NUP98-205ENST00000397007 TMPRSS4Q9NRS4 437 aa11.01□□□□□ -0.65
NUP98-205ENST00000397007 DDX3YO15523 660 aaKnown RBP11□□□□□ -0.65
NUP98-205ENST00000397007 TPM1P09493 284 aa11□□□□□ -0.65
NUP98-205ENST00000397007 CYLC1P35663 651 aaPredicted RBP11□□□□□ -0.65
NUP98-205ENST00000397007 PLK1P53350 603 aa11□□□□□ -0.65
NUP98-205ENST00000397007 COG7P83436 770 aa11□□□□□ -0.65
NUP98-205ENST00000397007 PIGHQ14442 188 aaPredicted RBP11□□□□□ -0.65
NUP98-205ENST00000397007 ASTLQ6HA08 431 aaPredicted RBP11□□□□□ -0.65
NUP98-205ENST00000397007 CXorf57Q6NSI4 855 aaKnown RBP11□□□□□ -0.65
NUP98-205ENST00000397007 C12orf40Q86WS4 652 aa11□□□□□ -0.65
NUP98-205ENST00000397007 RNF10Q8N5U6 811 aaKnown RBP11□□□□□ -0.65
NUP98-205ENST00000397007 HES6Q96HZ4 224 aa11□□□□□ -0.65
NUP98-205ENST00000397007 NOL6Q9H6R4 1146 aaKnown RBP11□□□□□ -0.65
NUP98-205ENST00000397007 TBC1D30Q9Y2I9 924 aa11□□□□□ -0.65
NUP98-205ENST00000397007 SHROOM3Q8TF72 1996 aa11□□□□□ -0.65
NUP98-205ENST00000397007 FAM72CH0Y354 149 aa11□□□□□ -0.65
NUP98-205ENST00000397007 L1CAMP32004 1257 aa11□□□□□ -0.65
NUP98-205ENST00000397007 TAS2R40P59535 323 aa11□□□□□ -0.65
NUP98-205ENST00000397007 PDGFRLQ15198 375 aa11□□□□□ -0.65
NUP98-205ENST00000397007 TDRD12Q587J7 1177 aaKnown RBP11□□□□□ -0.65
NUP98-205ENST00000397007 FAM72AQ5TYM5 149 aa11□□□□□ -0.65
NUP98-205ENST00000397007 FAM72DQ6L9T8 149 aa11□□□□□ -0.65
NUP98-205ENST00000397007 DNAJC24Q6P3W2 148 aa11□□□□□ -0.65
NUP98-205ENST00000397007 VPS36Q86VN1 386 aa11□□□□□ -0.65
NUP98-205ENST00000397007 FAM72BQ86X60 149 aa11□□□□□ -0.65
NUP98-205ENST00000397007 ZFP14Q9HCL3 533 aa11□□□□□ -0.65
NUP98-205ENST00000397007 TRIM10Q9UDY6 481 aa11□□□□□ -0.65
NUP98-205ENST00000397007 NUDT5Q9UKK9 219 aa11□□□□□ -0.65
NUP98-205ENST00000397007 STARD13Q9Y3M8 1113 aa11□□□□□ -0.65
NUP98-205ENST00000397007 LRRK1Q38SD2 2015 aa11□□□□□ -0.65
NUP98-205ENST00000397007 TRDMT1O14717 391 aaKnown RBP11□□□□□ -0.65
NUP98-205ENST00000397007 ACSL4O60488 711 aa11□□□□□ -0.65
NUP98-205ENST00000397007 GRAP2O75791 330 aa11□□□□□ -0.65
NUP98-205ENST00000397007 CTNNA1P35221 906 aaKnown RBP11□□□□□ -0.65
NUP98-205ENST00000397007 ADRA1BP35368 520 aa11□□□□□ -0.65
NUP98-205ENST00000397007 MESP2Q0VG99 397 aa11□□□□□ -0.65
NUP98-205ENST00000397007 ARHGAP29Q52LW3 1261 aa11□□□□□ -0.65
NUP98-205ENST00000397007 DCAF6Q58WW2 860 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms