RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 PMM2O15305 246 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 CACNG3O60359 315 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 FAM200BP0CF97 657 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 RARGP13631 454 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 NDUFV2P19404 249 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 NTSR1P30989 418 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 ATP5C1P36542 298 aaKnown RBP10.84□□□□□ -0.67
NEDD8-202ENST00000396828 KIF11P52732 1056 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 FAM193AP78312 1265 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 RPL6Q02878 288 aaKnown RBP10.84□□□□□ -0.67
NEDD8-202ENST00000396828 CBWD6Q4V339 395 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 ZNF394Q53GI3 561 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 CBWD3Q5JTY5 395 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 CBWD5Q5RIA9 395 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 PPP1R26Q5T8A7 1209 aaPredicted RBP10.84□□□□□ -0.67
NEDD8-202ENST00000396828 PEAR1Q5VY43 1037 aaPredicted RBP10.84□□□□□ -0.67
NEDD8-202ENST00000396828 LYSMD4Q5XG99 296 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 GRAMD4Q6IC98 578 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 SLC23A3Q6PIS1 610 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 Q6ZNB5 142 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 CCDC150Q8NCX0 1101 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 FBXL13Q8NEE6 735 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 ZNF397Q8NF99 534 aaPredicted RBP10.84□□□□□ -0.67
NEDD8-202ENST00000396828 TAF4BQ92750 862 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 SEMA4DQ92854 862 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 TRIM44Q96DX7 344 aaPredicted RBP10.84□□□□□ -0.67
NEDD8-202ENST00000396828 SPACA7Q96KW9 195 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 TMEM121BQ9BXQ6 578 aaPredicted RBP10.84□□□□□ -0.67
NEDD8-202ENST00000396828 FBXO44Q9H4M3 255 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 CACNA2D2Q9NY47 1150 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 MARK1Q9P0L2 795 aa10.84□□□□□ -0.67
NEDD8-202ENST00000396828 CILPO75339 1184 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 STC2O76061 302 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 PROS1P07225 676 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 P4HA1P13674 534 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 CEACAM1P13688 526 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 CSRP1P21291 193 aaKnown RBP10.83□□□□□ -0.68
NEDD8-202ENST00000396828 PON1P27169 355 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 KCNMA1Q12791 1236 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 TBX2Q13207 712 aaPredicted RBP10.83□□□□□ -0.68
NEDD8-202ENST00000396828 FIGNQ5HY92 759 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 C10orf120Q5SQS8 335 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 CCDC186Q7Z3E2 898 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 CNGA4Q8IV77 575 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 CHPFQ8IZ52 775 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 EHBP1Q8NDI1 1231 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 KCNV2Q8TDN2 545 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 IPO4Q8TEX9 1081 aaKnown RBP10.83□□□□□ -0.68
NEDD8-202ENST00000396828 CPLX3Q8WVH0 158 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 ARID3AQ99856 593 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 GABRG3Q99928 467 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 CRACR2AQ9BSW2 395 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 NT5C1AQ9BXI3 368 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 EDEM3Q9BZQ6 932 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 IMPG2Q9BZV3 1241 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 PLCB1Q9NQ66 1216 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 FAM207AQ9NSI2 230 aaPredicted RBP10.83□□□□□ -0.68
NEDD8-202ENST00000396828 NAGPAQ9UK23 515 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 CLEC4EQ9ULY5 219 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 CYP8B1Q9UNU6 501 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 SIK3Q9Y2K2 1263 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 DAAM1Q9Y4D1 1078 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 USP3Q9Y6I4 520 aa10.83□□□□□ -0.68
NEDD8-202ENST00000396828 SPAARA0A1B0GVQ0 90 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 A0A1W2PQJ5 194 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 AKR1B15C9JRZ8 316 aaPredicted RBP10.82□□□□□ -0.68
NEDD8-202ENST00000396828 NRDCO43847 1150 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 CFIP05156 583 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 HMBSP08397 361 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 SLC9A1P19634 815 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 MAOBP27338 520 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 CASP14P31944 242 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 DGKGP49619 791 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 KLK7P49862 253 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 ZNF33AQ06730 810 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 GEN1Q17RS7 908 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 TSR1Q2NL82 804 aaKnown RBP10.82□□□□□ -0.68
NEDD8-202ENST00000396828 SPDYCQ5MJ68 293 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 FYB2Q5VWT5 728 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 TRIM65Q6PJ69 517 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 UNQ6494/PRO21346Q6UXR6 183 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 PIP4P1Q86T03 277 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 SLC4A11Q8NBS3 891 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 NDRG1Q92597 394 aaKnown RBP10.82□□□□□ -0.68
NEDD8-202ENST00000396828 TATDN2Q93075 761 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 MRGPRX1Q96LB2 322 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 FAM81BQ96LP2 452 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 SCNM1Q9BWG6 230 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 GTPBP2Q9BX10 602 aaKnown RBP10.82□□□□□ -0.68
NEDD8-202ENST00000396828 NUSAP1Q9BXS6 441 aaKnown RBP10.82□□□□□ -0.68
NEDD8-202ENST00000396828 DUSP16Q9BY84 665 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 INTS2Q9H0H0 1204 aaKnown RBP10.82□□□□□ -0.68
NEDD8-202ENST00000396828 CAPN10Q9HC96 672 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 RAB20Q9NX57 234 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 WDR35Q9P2L0 1181 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 DNMT3LQ9UJW3 386 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 FBXO10Q9UK96 956 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 CAPN11Q9UMQ6 739 aa10.82□□□□□ -0.68
NEDD8-202ENST00000396828 LUC7L2Q9Y383 392 aaKnown RBP10.82□□□□□ -0.68
NEDD8-202ENST00000396828 COQ4Q9Y3A0 265 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms