RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 FBXW8Q8N3Y1 598 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 PRICKLE1Q96MT3 831 aaPredicted RBP10.14□□□□□ -0.79
TRIM39-203ENST00000396547 CPXM1Q96SM3 734 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 IDI2Q9BXS1 227 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 ZNF341Q9BYN7 854 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 ANKEF1Q9NU02 776 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 ARHGEF38Q9NXL2 777 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 CYTH4Q9UIA0 394 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 GJA3Q9Y6H8 435 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 STX16-NPEPL1H3BU86 382 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 KLF11O14901 512 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 MAFGO15525 162 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 DNAJA2O60884 412 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 AMHP03971 560 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 HMGCRP04035 888 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 SMIM18P0DKX4 95 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 FGFR3P22607 806 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 MAGEA10P43363 369 aaPredicted RBP10.14□□□□□ -0.79
TRIM39-203ENST00000396547 GTF2A2P52657 109 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 PRKCEQ02156 737 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 KCTD21Q4G0X4 260 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 TEDDM1Q5T9Z0 273 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 REM2Q8IYK8 340 aaPredicted RBP10.14□□□□□ -0.79
TRIM39-203ENST00000396547 TMIGD2Q96BF3 282 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 WDR55Q9H6Y2 383 aaPredicted RBP10.14□□□□□ -0.79
TRIM39-203ENST00000396547 CAAP1Q9H8G2 361 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 HERC5Q9UII4 1024 aaKnown RBP10.14□□□□□ -0.79
TRIM39-203ENST00000396547 GNEQ9Y223 722 aaKnown RBP10.14□□□□□ -0.79
TRIM39-203ENST00000396547 UBIAD1Q9Y5Z9 338 aa10.14□□□□□ -0.79
TRIM39-203ENST00000396547 TPP1O14773 563 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 CDK4P11802 303 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 AOC1P19801 751 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 BCAR1P56945 870 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 C1QTNF12Q5T7M4 302 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 OR6B2Q6IFH4 312 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 ATG14Q6ZNE5 492 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 CAND1Q86VP6 1230 aaKnown RBP10.13□□□□□ -0.79
TRIM39-203ENST00000396547 PQLC1Q8N2U9 271 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.13□□□□□ -0.79
TRIM39-203ENST00000396547 SAMD3Q8N6K7 520 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 CMTM5Q96DZ9 223 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 LENG8Q96PV6 779 aaPredicted RBP10.13□□□□□ -0.79
TRIM39-203ENST00000396547 Q9H521 79 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 POPDC2Q9HBU9 364 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 DNAJB4Q9UDY4 337 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 SIPA1L1O43166 1804 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 WDR27A2RRH5 827 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 HMX2A2RU54 273 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 SPDYE2BA6NHP3 402 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 CSPG5O95196 566 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 HSPA4LO95757 839 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 PENKP01210 267 aaPredicted RBP10.13□□□□□ -0.79
TRIM39-203ENST00000396547 SPDYE6P0CI01 402 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 COX4I1P13073 169 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 POLR2BP30876 1174 aaKnown RBP10.13□□□□□ -0.79
TRIM39-203ENST00000396547 RGS7P49802 495 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 FLOT2Q14254 428 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 KCNJ11Q14654 390 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 PGM5Q15124 567 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 SPDYE2Q495Y8 402 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 HSP90AA5PQ58FG0 334 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 MAVSQ7Z434 540 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 CCDC60Q8IWA6 550 aaPredicted RBP10.13□□□□□ -0.79
TRIM39-203ENST00000396547 GRIN3AQ8TCU5 1115 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 ERLEC1Q96DZ1 483 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 PLEKHG4BQ96PX9 1271 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 ADPGKQ9BRR6 497 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 MAGEB5Q9BZ81 275 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 TMEM39BQ9GZU3 492 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 KLC2Q9H0B6 622 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 PTTG2Q9NZH5 202 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 ARHGAP26Q9UNA1 814 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 SSC5DA1L4H1 1573 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 PCNTO95613 3336 aa10.13□□□□□ -0.79
TRIM39-203ENST00000396547 SLC15A5A6NIM6 579 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 TMEM88BA6NKF7 163 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 CCNT2O60583 730 aaKnown RBP10.12□□□□□ -0.79
TRIM39-203ENST00000396547 ERBB2P04626 1255 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 RPL10P27635 214 aaKnown RBP10.12□□□□□ -0.79
TRIM39-203ENST00000396547 TYK2P29597 1187 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 JAK3P52333 1124 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 PGGT1BP53609 377 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 BAATQ14032 418 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-203ENST00000396547 TMEM259Q4ZIN3 620 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 ARMCX6Q7L4S7 300 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 CMC1Q7Z7K0 106 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 FAM83AQ86UY5 434 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 SNX32Q86XE0 403 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 NCAPG2Q86XI2 1143 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 CATSPER2Q96P56 530 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 PEBP4Q96S96 227 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 DCUN1D5Q9BTE7 237 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 CYP26B1Q9NR63 512 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 TXNDC16Q9P2K2 825 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 FIS1Q9Y3D6 152 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 PPME1Q9Y570 386 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 GREB1LQ9C091 1923 aaPredicted RBP10.12□□□□□ -0.79
TRIM39-203ENST00000396547 NFASCO94856 1347 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 CCDC78A2IDD5 438 aa10.12□□□□□ -0.79
TRIM39-203ENST00000396547 H3BNX3 289 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms