RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 TSEN34Q9BSV6 310 aaKnown RBP16.68■□□□□ 0.26
SNX6-202ENST00000396526 BRD8Q9H0E9 1235 aa16.68■□□□□ 0.26
SNX6-202ENST00000396526 SSU72Q9NP77 194 aaKnown RBP16.68■□□□□ 0.26
SNX6-202ENST00000396526 PNPLA8Q9NP80 782 aa16.68■□□□□ 0.26
SNX6-202ENST00000396526 I3L4J1 428 aa16.68■□□□□ 0.26
SNX6-202ENST00000396526 NRP1O14786 923 aa16.68■□□□□ 0.26
SNX6-202ENST00000396526 MTSS1O43312 755 aa16.68■□□□□ 0.26
SNX6-202ENST00000396526 YWHAHQ04917 246 aaPredicted RBP16.68■□□□□ 0.26
SNX6-202ENST00000396526 RFX8Q6ZV50 586 aa16.68■□□□□ 0.26
SNX6-202ENST00000396526 PGAP3Q96FM1 320 aaPredicted RBP16.68■□□□□ 0.26
SNX6-202ENST00000396526 SUSD3Q96L08 255 aa16.68■□□□□ 0.26
SNX6-202ENST00000396526 RASSF4Q9H2L5 321 aa16.68■□□□□ 0.26
SNX6-202ENST00000396526 CSNK1G1Q9HCP0 422 aa16.68■□□□□ 0.26
SNX6-202ENST00000396526 MLXIPLQ9NP71 852 aa16.68■□□□□ 0.26
SNX6-202ENST00000396526 TMEM51Q9NW97 253 aa16.68■□□□□ 0.26
SNX6-202ENST00000396526 M0QZQ0 153 aa16.67■□□□□ 0.26
SNX6-202ENST00000396526 KRT37O76014 449 aa16.67■□□□□ 0.26
SNX6-202ENST00000396526 ZWINTO95229 277 aa16.67■□□□□ 0.26
SNX6-202ENST00000396526 HCAR3P49019 387 aa16.67■□□□□ 0.26
SNX6-202ENST00000396526 IFRD2Q12894 506 aaPredicted RBP16.67■□□□□ 0.26
SNX6-202ENST00000396526 MTM1Q13496 603 aa16.67■□□□□ 0.26
SNX6-202ENST00000396526 SYCP2LQ5T4T6 812 aa16.67■□□□□ 0.26
SNX6-202ENST00000396526 FAM171BQ6P995 826 aa16.67■□□□□ 0.26
SNX6-202ENST00000396526 ACTR5Q9H9F9 607 aaPredicted RBP16.67■□□□□ 0.26
SNX6-202ENST00000396526 PIGVQ9NUD9 493 aa16.67■□□□□ 0.26
SNX6-202ENST00000396526 FBXW11Q9UKB1 542 aa16.67■□□□□ 0.26
SNX6-202ENST00000396526 SPAG7O75391 227 aa16.67■□□□□ 0.26
SNX6-202ENST00000396526 GNRH1P01148 92 aa16.67■□□□□ 0.26
SNX6-202ENST00000396526 SLC10A2Q12908 348 aaPredicted RBP16.67■□□□□ 0.26
SNX6-202ENST00000396526 CBLBQ13191 982 aa16.67■□□□□ 0.26
SNX6-202ENST00000396526 ANKRD20A2Q5SQ80 823 aa16.67■□□□□ 0.26
SNX6-202ENST00000396526 ANKRD20A1Q5TYW2 823 aa16.67■□□□□ 0.26
SNX6-202ENST00000396526 ANKRD20A3Q5VUR7 823 aa16.67■□□□□ 0.26
SNX6-202ENST00000396526 LRRC6Q86X45 466 aa16.67■□□□□ 0.26
SNX6-202ENST00000396526 PAAF1Q9BRP4 392 aa16.67■□□□□ 0.26
SNX6-202ENST00000396526 ANKRD65E5RJM6 399 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 YY1P25490 414 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 SCAPQ12770 1279 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 HFE2Q6ZVN8 426 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 CCNJLQ8IV13 435 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 DCP1BQ8IZD4 617 aaKnown RBP16.66■□□□□ 0.26
SNX6-202ENST00000396526 C4orf33Q8N1A6 199 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 ZMIZ2Q8NF64 920 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 HASPINQ8TF76 798 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 CAPNS2Q96L46 248 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 COLEC11Q9BWP8 271 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 FTHL17Q9BXU8 183 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 ADAM33Q9BZ11 813 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 IQCGQ9H095 443 aaKnown RBP16.66■□□□□ 0.26
SNX6-202ENST00000396526 STARD7Q9NQZ5 370 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 SEPT10Q9P0V9 454 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 TCRBV9S1A1TA0A576 114 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 DGKIO75912 1065 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 KRT4P19013 534 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 CYP2C18P33260 490 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 PAFAH1B3Q15102 231 aaKnown RBP16.66■□□□□ 0.26
SNX6-202ENST00000396526 BSPRYQ5W0U4 402 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 SCML4Q8N228 414 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 LRRC8CQ8TDW0 803 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 PXYLP1Q8TE99 480 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 GCAP28676 217 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 GLUD2P49448 558 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 SEMA5AQ13591 1074 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 PIGWQ7Z7B1 504 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 SLC26A11Q86WA9 606 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 ABI1Q8IZP0 508 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 COLGALT1Q8NBJ5 622 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 APBB2Q92870 758 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 HMX1Q9NP08 348 aaPredicted RBP16.66■□□□□ 0.26
SNX6-202ENST00000396526 RGS18Q9NS28 235 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 PCDHB8Q9UN66 801 aa16.66■□□□□ 0.26
SNX6-202ENST00000396526 CKBP12277 381 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 MLNP12872 115 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 PITX1P78337 314 aaPredicted RBP16.65■□□□□ 0.26
SNX6-202ENST00000396526 PARP6Q2NL67 630 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 BTBD8Q5XKL5 378 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 C6orf89Q6UWU4 347 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 MICALL1Q8N3F8 863 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 ADAM32Q8TC27 787 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 OLFM3Q96PB7 478 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 NAT9Q9BTE0 207 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 PITPNM3Q9BZ71 974 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 USP15Q9Y4E8 981 aaPredicted RBP16.65■□□□□ 0.26
SNX6-202ENST00000396526 USP3Q9Y6I4 520 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 MFSD11O43934 449 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 NEFHP12036 1026 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 IGFBP6P24592 240 aaPredicted RBP16.65■□□□□ 0.26
SNX6-202ENST00000396526 GRIK1P39086 918 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 NFE2Q16621 373 aaPredicted RBP16.65■□□□□ 0.26
SNX6-202ENST00000396526 NOMO2Q5JPE7 1267 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 CASC4Q6P4E1 433 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 PID1Q7Z2X4 250 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 BNIPLQ7Z465 357 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 PPM1NQ8N819 430 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 LGMNQ99538 433 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 PRDM12Q9H4Q4 367 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 FGFR1OP2Q9NVK5 253 aa16.65■□□□□ 0.26
SNX6-202ENST00000396526 KLHL8Q9P2G9 620 aaPredicted RBP16.65■□□□□ 0.26
SNX6-202ENST00000396526 RNF103O00237 685 aa16.64■□□□□ 0.26
SNX6-202ENST00000396526 AOC2O75106 756 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms