RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 ZC3H12AQ5D1E8 599 aaKnown RBP14.18□□□□□ -0.14
VAPB-202ENST00000395802 BZW1Q7L1Q6 419 aaKnown RBP14.18□□□□□ -0.14
VAPB-202ENST00000395802 SLC39A13Q96H72 371 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 ANKZF1Q9H8Y5 726 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 PIDD1Q9HB75 910 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 PCDH18Q9HCL0 1135 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 OR12D3Q9UGF7 316 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 CCDC195A0A1B0GUA6 201 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 C3orf70A6NLC5 250 aaPredicted RBP14.18□□□□□ -0.14
VAPB-202ENST00000395802 KCNU1A8MYU2 1149 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 DAPK3O43293 454 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 MSI1O43347 362 aaKnown RBP14.18□□□□□ -0.14
VAPB-202ENST00000395802 COCHO43405 550 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 TBX18O95935 607 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 HDCP19113 662 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 CHRNA3P32297 505 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 C2orf54Q08AI8 447 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 KLF1Q13351 362 aaPredicted RBP14.18□□□□□ -0.14
VAPB-202ENST00000395802 GLE1Q53GS7 698 aaKnown RBP14.18□□□□□ -0.14
VAPB-202ENST00000395802 RAB6CQ53S08 254 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 ANKRD20A8PQ5CZ79 823 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 KAZNQ674X7 775 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 RFX6Q8HWS3 928 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 TMC8Q8IU68 726 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 CCDC26Q8TAB7 109 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 ACSF2Q96CM8 615 aaPredicted RBP14.18□□□□□ -0.14
VAPB-202ENST00000395802 RNF157Q96PX1 679 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 HEMGNQ9BXL5 484 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 RAB6CQ9H0N0 254 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 IL21Q9HBE4 155 aa14.18□□□□□ -0.14
VAPB-202ENST00000395802 TRAV19A0A0A6YYK7 116 aa14.17□□□□□ -0.14
VAPB-202ENST00000395802 EEF2KO00418 725 aaKnown RBP14.17□□□□□ -0.14
VAPB-202ENST00000395802 APOL1O14791 398 aa14.17□□□□□ -0.14
VAPB-202ENST00000395802 PAPLNO95428 1278 aa14.17□□□□□ -0.14
VAPB-202ENST00000395802 MYL4P12829 197 aa14.17□□□□□ -0.14
VAPB-202ENST00000395802 SLC11A2P49281 568 aa14.17□□□□□ -0.14
VAPB-202ENST00000395802 NRG1Q02297 640 aaPredicted RBP14.17□□□□□ -0.14
VAPB-202ENST00000395802 LMNB2Q03252 620 aa14.17□□□□□ -0.14
VAPB-202ENST00000395802 LRRC31Q6UY01 552 aa14.17□□□□□ -0.14
VAPB-202ENST00000395802 BBS12Q6ZW61 710 aa14.17□□□□□ -0.14
VAPB-202ENST00000395802 MAATS1Q7Z4T9 603 aa14.17□□□□□ -0.14
VAPB-202ENST00000395802 ADGRD2Q7Z7M1 963 aa14.17□□□□□ -0.14
VAPB-202ENST00000395802 MMGT1Q8N4V1 131 aa14.17□□□□□ -0.14
VAPB-202ENST00000395802 AZIN2Q96A70 460 aa14.17□□□□□ -0.14
VAPB-202ENST00000395802 FAF2Q96CS3 445 aa14.17□□□□□ -0.14
VAPB-202ENST00000395802 FCRL2Q96LA5 508 aaPredicted RBP14.17□□□□□ -0.14
VAPB-202ENST00000395802 DDX50Q9BQ39 737 aaKnown RBP14.17□□□□□ -0.14
VAPB-202ENST00000395802 AP1M1Q9BXS5 423 aa14.17□□□□□ -0.14
VAPB-202ENST00000395802 LRRC3Q9BY71 257 aa14.17□□□□□ -0.14
VAPB-202ENST00000395802 DCLK3Q9C098 648 aa14.17□□□□□ -0.14
VAPB-202ENST00000395802 SLITRK6Q9H5Y7 841 aa14.17□□□□□ -0.14
VAPB-202ENST00000395802 TRPC7Q9HCX4 862 aa14.17□□□□□ -0.14
VAPB-202ENST00000395802 RBM12Q9NTZ6 932 aaKnown RBP14.17□□□□□ -0.14
VAPB-202ENST00000395802 TNRC18O15417 2968 aaPredicted RBP14.16□□□□□ -0.14
VAPB-202ENST00000395802 EPOPA6NHQ4 379 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 APOC4-APOC2K7ER74 178 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 CREB3O43889 395 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 CST8O60676 142 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 RFPL2O75678 378 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 ZNF189O75820 626 aaPredicted RBP14.16□□□□□ -0.14
VAPB-202ENST00000395802 OLFM2O95897 454 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 IGLV3-27P01718 113 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 APOC2P02655 101 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 MBL2P11226 248 aaPredicted RBP14.16□□□□□ -0.14
VAPB-202ENST00000395802 H2AFXP16104 143 aaPredicted RBP14.16□□□□□ -0.14
VAPB-202ENST00000395802 TGM2P21980 687 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 NR2C2P49116 596 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 FNTAP49354 379 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 TPI1P60174 286 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 CCNG2Q16589 344 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 AADACL2Q6P093 401 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 TMEM184AQ6ZMB5 413 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 GAREM2Q75VX8 874 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 TMEM150AQ86TG1 271 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 DDX42Q86XP3 938 aaKnown RBP eCLIP14.16□□□□□ -0.14
VAPB-202ENST00000395802 GRK7Q8WTQ7 553 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 P3H4Q92791 437 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 RETREG1Q9H6L5 497 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 CATSPERBQ9H7T0 1116 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 ZNF334Q9HCZ1 680 aaPredicted RBP14.16□□□□□ -0.14
VAPB-202ENST00000395802 GPATCH2LQ9NWQ4 482 aa14.16□□□□□ -0.14
VAPB-202ENST00000395802 A0A1W2PRU2 124 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 FGF10O15520 208 aaPredicted RBP14.15□□□□□ -0.14
VAPB-202ENST00000395802 PHF2O75151 1096 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 PAGE1O75459 146 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 LATS1O95835 1130 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 CKMP06732 381 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 TUBBP07437 444 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 RHOP08100 348 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 CD48P09326 243 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 KRT10P13645 584 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 AVPR1AP37288 418 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 MLLT6P55198 1093 aaPredicted RBP14.15□□□□□ -0.14
VAPB-202ENST00000395802 CYP1B1Q16678 543 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 CA9Q16790 459 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 FBXO38Q6PIJ6 1188 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 RFX8Q6ZV50 586 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 ADAT2Q7Z6V5 191 aaKnown RBP14.15□□□□□ -0.14
VAPB-202ENST00000395802 EFHBQ8N7U6 833 aa14.15□□□□□ -0.14
VAPB-202ENST00000395802 C12orf50Q8NA57 414 aaPredicted RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms