RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 CDKL3Q8IVW4 592 aaPredicted RBP18.49■□□□□ 0.55
SREBF1-204ENST00000395756 ZNF513Q8N8E2 541 aaPredicted RBP18.49■□□□□ 0.55
SREBF1-204ENST00000395756 CCDC63Q8NA47 563 aa18.49■□□□□ 0.55
SREBF1-204ENST00000395756 TCP10LQ8TDR4 215 aa18.49■□□□□ 0.55
SREBF1-204ENST00000395756 HTR3CQ8WXA8 447 aa18.49■□□□□ 0.55
SREBF1-204ENST00000395756 CCT6BQ92526 530 aa18.49■□□□□ 0.55
SREBF1-204ENST00000395756 RNF186Q9NXI6 227 aa18.49■□□□□ 0.55
SREBF1-204ENST00000395756 SLC24A2Q9UI40 661 aa18.49■□□□□ 0.55
SREBF1-204ENST00000395756 STAP1Q9ULZ2 295 aa18.49■□□□□ 0.55
SREBF1-204ENST00000395756 MYO18AQ92614 2054 aaKnown RBP18.49■□□□□ 0.55
SREBF1-204ENST00000395756 ZSWIM8A7E2V4 1837 aa18.49■□□□□ 0.55
SREBF1-204ENST00000395756 OR4Q2P0C623 313 aa18.49■□□□□ 0.55
SREBF1-204ENST00000395756 KLHL38Q2WGJ6 581 aa18.49■□□□□ 0.55
SREBF1-204ENST00000395756 TRMT10BQ6PF06 316 aaKnown RBP18.49■□□□□ 0.55
SREBF1-204ENST00000395756 STRADAQ7RTN6 431 aa18.49■□□□□ 0.55
SREBF1-204ENST00000395756 SCAMP5Q8TAC9 235 aa18.49■□□□□ 0.55
SREBF1-204ENST00000395756 DCAKDQ8WVC6 231 aa18.49■□□□□ 0.55
SREBF1-204ENST00000395756 CCDC134Q9H6E4 229 aa18.49■□□□□ 0.55
SREBF1-204ENST00000395756 SLC17A6Q9P2U8 582 aa18.49■□□□□ 0.55
SREBF1-204ENST00000395756 USP15Q9Y4E8 981 aaPredicted RBP18.49■□□□□ 0.55
SREBF1-204ENST00000395756 I6L893 689 aaPredicted RBP18.48■□□□□ 0.55
SREBF1-204ENST00000395756 EEF2KO00418 725 aaKnown RBP18.48■□□□□ 0.55
SREBF1-204ENST00000395756 NDC80O14777 642 aa18.48■□□□□ 0.55
SREBF1-204ENST00000395756 CHADO15335 359 aa18.48■□□□□ 0.55
SREBF1-204ENST00000395756 SPATA21Q7Z572 469 aa18.48■□□□□ 0.55
SREBF1-204ENST00000395756 MYLPFQ96A32 169 aa18.48■□□□□ 0.55
SREBF1-204ENST00000395756 MAGEB18Q96M61 343 aa18.48■□□□□ 0.55
SREBF1-204ENST00000395756 SIK2Q9H0K1 926 aa18.48■□□□□ 0.55
SREBF1-204ENST00000395756 PRDM12Q9H4Q4 367 aa18.48■□□□□ 0.55
SREBF1-204ENST00000395756 TMLHEQ9NVH6 421 aa18.48■□□□□ 0.55
SREBF1-204ENST00000395756 IRAK4Q9NWZ3 460 aa18.48■□□□□ 0.55
SREBF1-204ENST00000395756 USP12O75317 370 aa18.48■□□□□ 0.55
SREBF1-204ENST00000395756 ASMTLO95671 621 aa18.48■□□□□ 0.55
SREBF1-204ENST00000395756 F7P08709 466 aaPredicted RBP18.48■□□□□ 0.55
SREBF1-204ENST00000395756 SRGAP2BP0DMP2 458 aa18.48■□□□□ 0.55
SREBF1-204ENST00000395756 SCTRP47872 440 aa18.48■□□□□ 0.55
SREBF1-204ENST00000395756 UPP1Q16831 310 aa18.48■□□□□ 0.55
SREBF1-204ENST00000395756 CES3Q6UWW8 571 aa18.48■□□□□ 0.55
SREBF1-204ENST00000395756 LIMS2Q7Z4I7 341 aa18.48■□□□□ 0.55
SREBF1-204ENST00000395756 COLGALT1Q8NBJ5 622 aa18.48■□□□□ 0.55
SREBF1-204ENST00000395756 SERAC1Q96JX3 654 aa18.48■□□□□ 0.55
SREBF1-204ENST00000395756 SLC13A1Q9BZW2 595 aa18.48■□□□□ 0.55
SREBF1-204ENST00000395756 PYGBP11216 843 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 LHX1P48742 406 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 NUMBP49757 651 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 ANKRD20A2Q5SQ80 823 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 ANKRD20A1Q5TYW2 823 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 ANKRD20A3Q5VUR7 823 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 ADGRD1Q6QNK2 874 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 TRPM8Q7Z2W7 1104 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 TDRPQ86YL5 185 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 P2RY11Q96G91 374 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 NPY6RQ99463 290 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 ELF1P32519 619 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 ACTN3Q08043 901 aaPredicted RBP18.47■□□□□ 0.55
SREBF1-204ENST00000395756 CGB2Q6NT52 195 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 LRRTM3Q86VH5 581 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 LRRC8CQ8TDW0 803 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 HAUS2Q9NVX0 235 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 KLHL33A6NCF5 533 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 ADAMTS4O75173 837 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 OVGP1Q12889 678 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 NR1H3Q13133 447 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 LPIN1Q14693 890 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 PID1Q7Z2X4 250 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 YTHDF3Q7Z739 585 aaKnown RBP18.47■□□□□ 0.55
SREBF1-204ENST00000395756 RMDN2Q96LZ7 410 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 TTLL3Q9Y4R7 772 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 ACTL7BQ9Y614 415 aa18.47■□□□□ 0.55
SREBF1-204ENST00000395756 CFAP69A5D8W1 941 aa18.46■□□□□ 0.55
SREBF1-204ENST00000395756 RNF103O00237 685 aa18.46■□□□□ 0.55
SREBF1-204ENST00000395756 DAB1O75553 588 aa18.46■□□□□ 0.55
SREBF1-204ENST00000395756 SUN1O94901 812 aa18.46■□□□□ 0.55
SREBF1-204ENST00000395756 ZFXP17010 805 aaPredicted RBP18.46■□□□□ 0.55
SREBF1-204ENST00000395756 DAOAP59103 153 aa18.46■□□□□ 0.55
SREBF1-204ENST00000395756 SDHAF4Q5VUM1 108 aa18.46■□□□□ 0.55
SREBF1-204ENST00000395756 KIRREL3Q8IZU9 778 aa18.46■□□□□ 0.55
SREBF1-204ENST00000395756 TTC17Q96AE7 1141 aa18.46■□□□□ 0.55
SREBF1-204ENST00000395756 TRPV6Q9H1D0 765 aa18.46■□□□□ 0.55
SREBF1-204ENST00000395756 WDR27A2RRH5 827 aa18.46■□□□□ 0.55
SREBF1-204ENST00000395756 TYROBPO43914 113 aa18.46■□□□□ 0.55
SREBF1-204ENST00000395756 KPNA6O60684 536 aa18.46■□□□□ 0.55
SREBF1-204ENST00000395756 UBOX5O94941 541 aa18.46■□□□□ 0.55
SREBF1-204ENST00000395756 ERCC2P18074 760 aa18.46■□□□□ 0.55
SREBF1-204ENST00000395756 RPL34P49207 117 aaKnown RBP18.46■□□□□ 0.55
SREBF1-204ENST00000395756 C11orf91Q3C1V1 193 aa18.46■□□□□ 0.55
SREBF1-204ENST00000395756 MROH9Q5TGP6 573 aa18.46■□□□□ 0.55
SREBF1-204ENST00000395756 DENND1AQ8TEH3 1009 aa18.46■□□□□ 0.55
SREBF1-204ENST00000395756 CELF6Q96J87 481 aaKnown RBP18.46■□□□□ 0.55
SREBF1-204ENST00000395756 SMYD2Q9NRG4 433 aa18.46■□□□□ 0.55
SREBF1-204ENST00000395756 PHTF1Q9UMS5 762 aa18.46■□□□□ 0.55
SREBF1-204ENST00000395756 TRIM49D1C9J1S8 452 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 IGHA2P01877 340 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 PSMB4P28070 264 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 ADRA1BP35368 520 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 IRX4P78413 519 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 IRF5Q13568 498 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 ITGA7Q13683 1181 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 UNC5AQ6ZN44 842 aa18.45■□□□□ 0.54
SREBF1-204ENST00000395756 RFX8Q6ZV50 586 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms