RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 CNTNAP2Q9UHC6 1331 aa16.61■□□□□ 0.25
PCDH1-203ENST00000394536 SCN7AQ01118 1682 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 DFFAO00273 331 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 SERPINE1P05121 402 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 BPGMP07738 259 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 GOT1P17174 413 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 ACAT1P24752 427 aaKnown RBP16.6■□□□□ 0.25
PCDH1-203ENST00000394536 PRAMEP78395 509 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 SLC6A3Q01959 620 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 PDK1Q15118 436 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 DEFB132Q7Z7B7 95 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 ZNF333Q96JL9 665 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 KLHL4Q9C0H6 718 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 CYP3A43Q9HB55 503 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 XPNPEP3Q9NQH7 507 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 MAFBQ9Y5Q3 323 aaPredicted RBP16.6■□□□□ 0.25
PCDH1-203ENST00000394536 MYO18AQ92614 2054 aaKnown RBP16.6■□□□□ 0.25
PCDH1-203ENST00000394536 FKBP6O75344 327 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 MOCS2O96007 188 aaPredicted RBP16.6■□□□□ 0.25
PCDH1-203ENST00000394536 BAG6P46379 1132 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 STILQ15468 1287 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 ARHGAP18Q8N392 663 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 EME1Q96AY2 570 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 HIC2Q96JB3 615 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 LPIN3Q9BQK8 851 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 ILKAPQ9H0C8 392 aaPredicted RBP16.6■□□□□ 0.25
PCDH1-203ENST00000394536 IARS2Q9NSE4 1012 aaKnown RBP16.6■□□□□ 0.25
PCDH1-203ENST00000394536 FAF1Q9UNN5 650 aaPredicted RBP16.6■□□□□ 0.25
PCDH1-203ENST00000394536 EFR3BQ9Y2G0 817 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 MSCO60682 206 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 METTL18O95568 372 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 FGFR1P11362 822 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 PSMB4P28070 264 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 NEK3P51956 506 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 PMF1Q6P1K2 205 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 PPP2R3CQ969Q6 453 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 FAXDC2Q96IV6 333 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 LRRC42Q9Y546 428 aa16.6■□□□□ 0.25
PCDH1-203ENST00000394536 XPOTO43592 962 aaKnown RBP16.59■□□□□ 0.25
PCDH1-203ENST00000394536 ASPAP45381 313 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 TPD52P55327 224 aaPredicted RBP16.59■□□□□ 0.25
PCDH1-203ENST00000394536 SLC25A11Q02978 314 aaKnown RBP16.59■□□□□ 0.25
PCDH1-203ENST00000394536 PRKD1Q15139 912 aaPredicted RBP16.59■□□□□ 0.25
PCDH1-203ENST00000394536 ARL13BQ3SXY8 428 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 RELL1Q8IUW5 271 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 REPS2Q8NFH8 660 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 MARK4Q96L34 752 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 CLIC5Q9NZA1 410 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 HBS1LQ9Y450 684 aaKnown RBP16.59■□□□□ 0.25
PCDH1-203ENST00000394536 A0A096LPK6 155 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 DNAJC6O75061 913 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 GSTT1P30711 240 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 HPS6Q86YV9 775 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 TTC39CQ8N584 583 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 APPL2Q8NEU8 664 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 OR52K1Q8NGK4 314 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 OR6P1Q8NGX9 317 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 PCDH19Q8TAB3 1148 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 AFG1LQ8WV93 481 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 PIWIL1Q96J94 861 aaKnown RBP16.59■□□□□ 0.25
PCDH1-203ENST00000394536 ZNF358Q9NW07 568 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 SLC7A8Q9UHI5 535 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 MID2Q9UJV3 735 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 MRPS22P82650 360 aaKnown RBP16.59■□□□□ 0.25
PCDH1-203ENST00000394536 ACAP1Q15027 740 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 TREML1Q86YW5 311 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 DEFB106AQ8N104 65 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 IPMKQ8NFU5 416 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 CATSPER2Q96P56 530 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 CDRT15Q96T59 188 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 LHX5Q9H2C1 402 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 CAB39LQ9H9S4 337 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 CYP4F12Q9HCS2 524 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 CYTH4Q9UIA0 394 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 PCDHGC3Q9UN70 934 aa16.59■□□□□ 0.25
PCDH1-203ENST00000394536 COL22A1Q8NFW1 1626 aaPredicted RBP16.58■□□□□ 0.25
PCDH1-203ENST00000394536 DCAF8L1A6NGE4 600 aa16.58■□□□□ 0.25
PCDH1-203ENST00000394536 PHGDHO43175 533 aaKnown RBP16.58■□□□□ 0.25
PCDH1-203ENST00000394536 SEC24DO94855 1032 aaPredicted RBP16.58■□□□□ 0.25
PCDH1-203ENST00000394536 JCHAINP01591 159 aa16.58■□□□□ 0.25
PCDH1-203ENST00000394536 DYNC1I2Q13409 638 aaKnown RBP16.58■□□□□ 0.25
PCDH1-203ENST00000394536 OLFML2BQ68BL8 750 aa16.58■□□□□ 0.25
PCDH1-203ENST00000394536 MTHFD1LQ6UB35 978 aa16.58■□□□□ 0.25
PCDH1-203ENST00000394536 SNX32Q86XE0 403 aa16.58■□□□□ 0.25
PCDH1-203ENST00000394536 CMASQ8NFW8 434 aaPredicted RBP16.58■□□□□ 0.25
PCDH1-203ENST00000394536 SLC2A14Q8TDB8 520 aa16.58■□□□□ 0.25
PCDH1-203ENST00000394536 ECSITQ9BQ95 431 aa16.58■□□□□ 0.25
PCDH1-203ENST00000394536 FSD1LQ9BXM9 530 aa16.58■□□□□ 0.25
PCDH1-203ENST00000394536 IL1RL2Q9HB29 575 aa16.58■□□□□ 0.25
PCDH1-203ENST00000394536 PIDD1Q9HB75 910 aa16.58■□□□□ 0.25
PCDH1-203ENST00000394536 TCF7L2Q9NQB0 619 aa16.58■□□□□ 0.25
PCDH1-203ENST00000394536 IRAK4Q9NWZ3 460 aa16.58■□□□□ 0.25
PCDH1-203ENST00000394536 CASQ2O14958 399 aaPredicted RBP16.58■□□□□ 0.24
PCDH1-203ENST00000394536 PLSCR1O15162 318 aa16.58■□□□□ 0.24
PCDH1-203ENST00000394536 DLDP09622 509 aaKnown RBP16.58■□□□□ 0.24
PCDH1-203ENST00000394536 HOXC6P09630 235 aa16.58■□□□□ 0.24
PCDH1-203ENST00000394536 NCAM1P13591 858 aa16.58■□□□□ 0.24
PCDH1-203ENST00000394536 GRK2P25098 689 aa16.58■□□□□ 0.24
PCDH1-203ENST00000394536 OAZ1P54368 228 aa16.58■□□□□ 0.24
PCDH1-203ENST00000394536 TBCCQ15814 346 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms