RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 IL17RCQ8NAC3 791 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ZBTB8BQ8NAP8 495 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 Q8NAQ8 132 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PRPF38AQ8NAV1 312 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SYT14Q8NB59 555 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GLIS1Q8NBF1 620 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GOLM1Q8NBJ4 401 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC38A9Q8NBW4 561 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ACBD4Q8NC06 268 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RELL2Q8NC24 303 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 KCT2Q8NC54 265 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PLA2G15Q8NCC3 412 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 HJURPQ8NCD3 748 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GLB1L3Q8NCI6 653 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PDPRQ8NCN5 879 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CSNK1G2-AS1Q8NCQ2 148 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 B3GALNT2Q8NCR0 500 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CLRN3Q8NCR9 226 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM156AQ8NDB6 213 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SMC1BQ8NDV3 1235 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF248Q8NDW4 579 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SETD9Q8NE22 299 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM13CQ8NE31 585 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CPEB3Q8NE35 698 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 BVESQ8NE79 360 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CATSPER1Q8NEC5 780 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MCPH1Q8NEM0 835 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SHCBP1Q8NEM2 672 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SUPT20HQ8NEM7 779 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 C17orf47Q8NEP4 570 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 C1orf162Q8NEQ5 155 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CHST13Q8NET6 341 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TMIEQ8NEW7 156 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FLCNQ8NFG4 579 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NUP43Q8NFH3 380 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MYRIPQ8NFW9 859 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 HELBQ8NG08 1087 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PJA1Q8NG27 643 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NPBQ8NG41 125 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 OR7D4Q8NG98 312 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 OR6J1Q8NGC5 347 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 OR56A1Q8NGH5 318 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 OR52N4Q8NGI2 321 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 OR5AN1Q8NGI8 311 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 OR10G9Q8NGN4 311 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 OR10G8Q8NGN5 311 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 OR14K1Q8NGZ2 314 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 OR56A3Q8NH54 315 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 LILRB1Q8NHL6 650 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 DDX55Q8NHQ9 600 aaKnown RBP eCLIP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MBD3L2Q8NHZ7 208 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 IL31RAQ8NI17 732 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 LINC01006Q8NI28 216 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CTCFLQ8NI51 663 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SCAMP5Q8TAC9 235 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC30A5Q8TAD4 765 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 OCC1Q8TAD7 63 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TYMSOSQ8TAI1 123 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TTC8Q8TAM2 541 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PPP1R35Q8TAP8 253 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SUN3Q8TAQ9 357 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FGFBP3Q8TAT2 258 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NEIL3Q8TAT5 605 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM76AQ8TAV0 307 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 C11orf45Q8TAV5 145 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM110DQ8TAY7 271 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FBXO30Q8TB52 745 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PUM2Q8TB72 1066 aaKnown RBP eCLIP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 HMGCLL1Q8TB92 370 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 KLHDC4Q8TBB5 520 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SLC35G2Q8TBE7 412 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 DNAJB14Q8TBM8 379 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CIRBP-AS1Q8TBR5 109 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PIP4K2CQ8TBX8 421 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MYCBPAPQ8TBZ2 947 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF564Q8TBZ8 553 aaPredicted RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MDM1Q8TC05 714 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CAGE1Q8TC20 777 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM71BQ8TC56 605 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 CPT1CQ8TCG5 803 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 STT3BQ8TCJ2 826 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 FAM200AQ8TCP9 573 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PHOSPHO1Q8TCT1 267 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PROKR1Q8TCW9 393 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RHPN1Q8TCX5 695 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 MRAPQ8TCY5 172 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GPT2Q8TD30 523 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 BRSK1Q8TDC3 778 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TMC1Q8TDI8 760 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 BCAS4Q8TDM0 211 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ELP5Q8TE02 316 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 TAS1R2Q8TE23 839 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ADAMTS16Q8TE57 1224 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 ADAMTS18Q8TE60 1221 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SSH3Q8TE77 659 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 GRHL3Q8TE85 626 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 NSUN6Q8TEA1 469 aaKnown RBP-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 RNF128Q8TEB7 428 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 SNX29Q8TEQ0 813 aa-0.06□□□□□ -2.42
TRAJ54-201ENST00000390484 PIGOQ8TEQ8 1089 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms