RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 PCBP1Q15365 356 aaKnown RBP eCLIP12.3□□□□□ -0.44
TRIM23-203ENST00000381018 DBN1Q16643 649 aa12.3□□□□□ -0.44
TRIM23-203ENST00000381018 DUSP28Q4G0W2 176 aa12.3□□□□□ -0.44
TRIM23-203ENST00000381018 RINLQ6ZS11 566 aa12.3□□□□□ -0.44
TRIM23-203ENST00000381018 MARK2Q7KZI7 788 aaKnown RBP12.3□□□□□ -0.44
TRIM23-203ENST00000381018 TTC7BQ86TV6 843 aa12.3□□□□□ -0.44
TRIM23-203ENST00000381018 ALYREFQ86V81 257 aaKnown RBP12.3□□□□□ -0.44
TRIM23-203ENST00000381018 CRLF3Q8IUI8 442 aa12.3□□□□□ -0.44
TRIM23-203ENST00000381018 STKLD1Q8NE28 680 aa12.3□□□□□ -0.44
TRIM23-203ENST00000381018 ZNF560Q96MR9 790 aa12.3□□□□□ -0.44
TRIM23-203ENST00000381018 NMUR2Q9GZQ4 415 aa12.3□□□□□ -0.44
TRIM23-203ENST00000381018 WWP1Q9H0M0 922 aa12.3□□□□□ -0.44
TRIM23-203ENST00000381018 MMADHCQ9H3L0 296 aaPredicted RBP12.3□□□□□ -0.44
TRIM23-203ENST00000381018 NXF3Q9H4D5 531 aaKnown RBP12.3□□□□□ -0.44
TRIM23-203ENST00000381018 EIF2B3Q9NR50 452 aaKnown RBP12.3□□□□□ -0.44
TRIM23-203ENST00000381018 FZD10Q9ULW2 581 aa12.3□□□□□ -0.44
TRIM23-203ENST00000381018 MFHAS1Q9Y4C4 1052 aa12.3□□□□□ -0.44
TRIM23-203ENST00000381018 LRRC42Q9Y546 428 aa12.3□□□□□ -0.44
TRIM23-203ENST00000381018 TRIP12Q14669 1992 aaPredicted RBP12.3□□□□□ -0.44
TRIM23-203ENST00000381018 TSC2P49815 1807 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 WDR27A2RRH5 827 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 KPNA7A9QM74 516 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 H0Y3Z8 333 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 PIRO00625 290 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 CYB561D2O14569 222 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 STRNO43815 780 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 SNNO75324 88 aaPredicted RBP12.29□□□□□ -0.44
TRIM23-203ENST00000381018 GPR32O75388 356 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 CAPN15O75808 1086 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 ALDH1A2O94788 518 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 ATP5BP06576 529 aaKnown RBP12.29□□□□□ -0.44
TRIM23-203ENST00000381018 SMPD1P17405 629 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 LMO2P25791 158 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 PNPLA4P41247 253 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 SULT1E1P49888 294 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 SLC25A52Q3SY17 297 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 CASC4Q6P4E1 433 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 KYAT3Q6YP21 454 aaKnown RBP12.29□□□□□ -0.44
TRIM23-203ENST00000381018 PSTKQ8IV42 348 aaKnown RBP12.29□□□□□ -0.44
TRIM23-203ENST00000381018 ARID3BQ8IVW6 561 aaPredicted RBP12.29□□□□□ -0.44
TRIM23-203ENST00000381018 ARHGAP24Q8N264 748 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 PYROXD2Q8N2H3 581 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 SMC1BQ8NDV3 1235 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 SLC2A14Q8TDB8 520 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 MIEF2Q96C03 454 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 NAF1Q96HR8 494 aaKnown RBP12.29□□□□□ -0.44
TRIM23-203ENST00000381018 FERMT1Q9BQL6 677 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 APOL6Q9BWW8 343 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 GDAP2Q9NXN4 497 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 TAS2R1Q9NYW7 299 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 RNF181Q9P0P0 153 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 ARMCX1Q9P291 453 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.29□□□□□ -0.44
TRIM23-203ENST00000381018 SDR42E2A6NKP2 422 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 XPO1O14980 1071 aaKnown RBP12.29□□□□□ -0.44
TRIM23-203ENST00000381018 XPOTO43592 962 aaKnown RBP12.29□□□□□ -0.44
TRIM23-203ENST00000381018 MFSD11O43934 449 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 OPHN1O60890 802 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 RARBP10826 455 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 AKAP5P24588 427 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 PTDSS1P48651 473 aaKnown RBP12.29□□□□□ -0.44
TRIM23-203ENST00000381018 NAB1Q13506 487 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 STXBP5Q5T5C0 1151 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 CES4AQ5XG92 561 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 LRRC8BQ6P9F7 803 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 DSTYKQ6XUX3 929 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 FAM131BQ86XD5 332 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 CCNJLQ8IV13 435 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 COLGALT1Q8NBJ5 622 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 APPL2Q8NEU8 664 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 ACMSDQ8TDX5 336 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 CDKL2Q92772 493 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 TNIP3Q96KP6 325 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 LGMNQ99538 433 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 OSMRQ99650 979 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 CDHR5Q9HBB8 845 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 ARHGEF4Q9NR80 690 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 STOML1Q9UBI4 398 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 PPARGC1AQ9UBK2 798 aaKnown RBP12.29□□□□□ -0.44
TRIM23-203ENST00000381018 GJD2Q9UKL4 321 aa12.29□□□□□ -0.44
TRIM23-203ENST00000381018 SF3B1O75533 1304 aaKnown RBP eCLIP12.28□□□□□ -0.442e-7■■■■■ 41.4
TRIM23-203ENST00000381018 CAPN14A8MX76 684 aa12.28□□□□□ -0.44
TRIM23-203ENST00000381018 H3BRJ5 948 aa12.28□□□□□ -0.44
TRIM23-203ENST00000381018 RNF103O00237 685 aa12.28□□□□□ -0.44
TRIM23-203ENST00000381018 LIN7AO14910 233 aaPredicted RBP12.28□□□□□ -0.44
TRIM23-203ENST00000381018 SPTLC1O15269 473 aa12.28□□□□□ -0.44
TRIM23-203ENST00000381018 DAB1O75553 588 aa12.28□□□□□ -0.44
TRIM23-203ENST00000381018 DARSP14868 501 aaKnown RBP12.28□□□□□ -0.44
TRIM23-203ENST00000381018 PGAM1P18669 254 aa12.28□□□□□ -0.44
TRIM23-203ENST00000381018 AXLP30530 894 aa12.28□□□□□ -0.44
TRIM23-203ENST00000381018 TAF6P49848 677 aa12.28□□□□□ -0.44
TRIM23-203ENST00000381018 NIPAL4Q0D2K0 466 aa12.28□□□□□ -0.44
TRIM23-203ENST00000381018 STX3Q13277 289 aa12.28□□□□□ -0.44
TRIM23-203ENST00000381018 TBCCQ15814 346 aa12.28□□□□□ -0.44
TRIM23-203ENST00000381018 SV2CQ496J9 727 aa12.28□□□□□ -0.44
TRIM23-203ENST00000381018 KHDC1Q4VXA5 237 aaKnown RBP12.28□□□□□ -0.44
TRIM23-203ENST00000381018 CMPK2Q5EBM0 449 aa12.28□□□□□ -0.44
TRIM23-203ENST00000381018 DPP9Q86TI2 863 aa12.28□□□□□ -0.44
TRIM23-203ENST00000381018 ADGRF2Q8IZF7 708 aa12.28□□□□□ -0.44
TRIM23-203ENST00000381018 DEFB106AQ8N104 65 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms