RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 GLUD2P49448 558 aa19.89■□□□□ 0.77
GMDS-201ENST00000380805 CXCR3P49682 368 aa19.89■□□□□ 0.77
GMDS-201ENST00000380805 TMED2Q15363 201 aa19.89■□□□□ 0.77
GMDS-201ENST00000380805 HEATR6Q6AI08 1181 aaKnown RBP19.89■□□□□ 0.77
GMDS-201ENST00000380805 C3orf62Q6ZUJ4 267 aa19.89■□□□□ 0.77
GMDS-201ENST00000380805 RFX8Q6ZV50 586 aa19.89■□□□□ 0.77
GMDS-201ENST00000380805 LRRTM3Q86VH5 581 aa19.89■□□□□ 0.77
GMDS-201ENST00000380805 VPS52Q8N1B4 723 aa19.89■□□□□ 0.77
GMDS-201ENST00000380805 CCDC110Q8TBZ0 833 aa19.89■□□□□ 0.77
GMDS-201ENST00000380805 HTR3CQ8WXA8 447 aa19.89■□□□□ 0.77
GMDS-201ENST00000380805 RHOBTB2Q9BYZ6 727 aa19.89■□□□□ 0.77
GMDS-201ENST00000380805 ETNK1Q9HBU6 452 aa19.89■□□□□ 0.77
GMDS-201ENST00000380805 TBK1Q9UHD2 729 aa19.89■□□□□ 0.77
GMDS-201ENST00000380805 PLXNA3P51805 1871 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 RASA4BC9J798 803 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 I6L893 689 aaPredicted RBP19.88■□□□□ 0.77
GMDS-201ENST00000380805 ARVCFO00192 962 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 PRPF4O43172 522 aaKnown RBP eCLIP19.88■□□□□ 0.77
GMDS-201ENST00000380805 RASA4O43374 803 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 MAP3K6O95382 1288 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 IGLV3-25P01717 112 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 NCAM1P13591 858 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 VAV1P15498 845 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 BDNFP23560 247 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 RABGGTBP53611 331 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 TSPY1Q01534 308 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 NME3Q13232 169 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 EIF4EBP2Q13542 120 aaPredicted RBP19.88■□□□□ 0.77
GMDS-201ENST00000380805 MPP2Q14168 576 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 ADGRD1Q6QNK2 874 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 CAND1Q86VP6 1230 aaKnown RBP19.88■□□□□ 0.77
GMDS-201ENST00000380805 SRRM1Q8IYB3 904 aaKnown RBP19.88■□□□□ 0.77
GMDS-201ENST00000380805 COLGALT2Q8IYK4 626 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 AGGF1Q8N302 714 aaeCLIP19.88■□□□□ 0.77
GMDS-201ENST00000380805 PRMT1Q99873 361 aaKnown RBP19.88■□□□□ 0.77
GMDS-201ENST00000380805 FAM107BQ9H098 131 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 SSU72Q9NP77 194 aaKnown RBP19.88■□□□□ 0.77
GMDS-201ENST00000380805 KANSL3Q9P2N6 904 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 MFHAS1Q9Y4C4 1052 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 A0A0A0MRY4 1105 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 EEF2KO00418 725 aaKnown RBP19.88■□□□□ 0.77
GMDS-201ENST00000380805 DDHD2O94830 711 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 OAZ2O95190 189 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 METTL18O95568 372 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 ELK3P41970 407 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 NOMO2Q5JPE7 1267 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 ZNF534Q76KX8 674 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 YTHDF3Q7Z739 585 aaKnown RBP19.88■□□□□ 0.77
GMDS-201ENST00000380805 IGDCC3Q8IVU1 814 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 PALM2Q8IXS6 379 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 TAB3Q8N5C8 712 aaPredicted RBP19.88■□□□□ 0.77
GMDS-201ENST00000380805 FBF1Q8TES7 1133 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 HASPINQ8TF76 798 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 SPATA13Q96N96 652 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 TMEM209Q96SK2 561 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 COLEC11Q9BWP8 271 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 ELAC1Q9H777 363 aaKnown RBP19.88■□□□□ 0.77
GMDS-201ENST00000380805 ANLNQ9NQW6 1124 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 TMPRSS4Q9NRS4 437 aa19.88■□□□□ 0.77
GMDS-201ENST00000380805 RRP15Q9Y3B9 282 aaKnown RBP19.88■□□□□ 0.77
GMDS-201ENST00000380805 MYO16Q9Y6X6 1858 aa19.87■□□□□ 0.77
GMDS-201ENST00000380805 POC1B-GALNT4F8VUJ3 575 aa19.87■□□□□ 0.77
GMDS-201ENST00000380805 C1QAP02745 245 aa19.87■□□□□ 0.77
GMDS-201ENST00000380805 GSTA2P09210 222 aa19.87■□□□□ 0.77
GMDS-201ENST00000380805 CDK16Q00536 496 aa19.87■□□□□ 0.77
GMDS-201ENST00000380805 YWHAHQ04917 246 aaPredicted RBP19.87■□□□□ 0.77
GMDS-201ENST00000380805 PDK1Q15118 436 aa19.87■□□□□ 0.77
GMDS-201ENST00000380805 QPCTQ16769 361 aa19.87■□□□□ 0.77
GMDS-201ENST00000380805 ARL13BQ3SXY8 428 aa19.87■□□□□ 0.77
GMDS-201ENST00000380805 C6orf89Q6UWU4 347 aa19.87■□□□□ 0.77
GMDS-201ENST00000380805 C4orf50Q6ZRC1 276 aa19.87■□□□□ 0.77
GMDS-201ENST00000380805 ARHGEF18Q6ZSZ5 1173 aa19.87■□□□□ 0.77
GMDS-201ENST00000380805 ZNF280BQ86YH2 543 aa19.87■□□□□ 0.77
GMDS-201ENST00000380805 URGCPQ8TCY9 931 aa19.87■□□□□ 0.77
GMDS-201ENST00000380805 MZB1Q8WU39 189 aa19.87■□□□□ 0.77
GMDS-201ENST00000380805 SGSM3Q96HU1 749 aa19.87■□□□□ 0.77
GMDS-201ENST00000380805 EIF2B3Q9NR50 452 aaKnown RBP19.87■□□□□ 0.77
GMDS-201ENST00000380805 DDIT4Q9NX09 232 aa19.87■□□□□ 0.77
GMDS-201ENST00000380805 TMEM161AQ9NX61 479 aa19.87■□□□□ 0.77
GMDS-201ENST00000380805 CHMP2BQ9UQN3 213 aa19.87■□□□□ 0.77
GMDS-201ENST00000380805 MKI67P46013 3256 aaKnown RBP19.87■□□□□ 0.77
GMDS-201ENST00000380805 VWA8A3KMH1 1905 aa19.87■□□□□ 0.77
GMDS-201ENST00000380805 TNFRSF10BO14763 440 aa19.86■□□□□ 0.77
GMDS-201ENST00000380805 PPP1R12AO14974 1030 aaPredicted RBP19.86■□□□□ 0.77
GMDS-201ENST00000380805 OPHN1O60890 802 aa19.86■□□□□ 0.77
GMDS-201ENST00000380805 FDFT1P37268 417 aa19.86■□□□□ 0.77
GMDS-201ENST00000380805 CDK7P50613 346 aa19.86■□□□□ 0.77
GMDS-201ENST00000380805 PPARDQ03181 441 aa19.86■□□□□ 0.77
GMDS-201ENST00000380805 BSPRYQ5W0U4 402 aa19.86■□□□□ 0.77
GMDS-201ENST00000380805 MICALCLQ6ZW33 695 aa19.86■□□□□ 0.77
GMDS-201ENST00000380805 LRRC8DQ7L1W4 858 aa19.86■□□□□ 0.77
GMDS-201ENST00000380805 CKAP2Q8WWK9 683 aa19.86■□□□□ 0.77
GMDS-201ENST00000380805 CYTH2Q99418 400 aa19.86■□□□□ 0.77
GMDS-201ENST00000380805 TBC1D13Q9NVG8 400 aa19.86■□□□□ 0.77
GMDS-201ENST00000380805 SMG5Q9UPR3 1016 aaKnown RBP19.86■□□□□ 0.77
GMDS-201ENST00000380805 SYNJ2BP-COX16A0A087WUM0 186 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 TCRBV9S1A1TA0A576 114 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 FAM47DPA6NHR8 397 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 FOXO6A8MYZ6 492 aa19.85■□□□□ 0.77
GMDS-201ENST00000380805 KBTBD13C9JR72 458 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms