RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 ATP2A2P16615 1042 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 RGS2P41220 211 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 MAGEA6P43360 314 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 MRPS6P82932 125 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 NME3Q13232 169 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 GNASQ5JWF2 1037 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 GPRIN1Q7Z2K8 1008 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 NME8Q8N427 588 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 ZNF513Q8N8E2 541 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 ADAM32Q8TC27 787 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 ZNF75CPQ92670 426 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 KATNAL1Q9BW62 490 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 ANLNQ9NQW6 1124 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 ARHGEF4Q9NR80 690 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 FAM105AQ9NUU6 356 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 PIH1D1Q9NWS0 290 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 ZC3H7BQ9UGR2 993 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 SHROOM3Q8TF72 1996 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 MYBPHLA2RUH7 354 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 I6L893 689 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 M0QYT0 321 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 TNPO2O14787 897 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 EDF1O60869 148 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 DGKIO75912 1065 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 GSTA1P08263 222 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 TSHRP16473 764 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 IBSPP21815 317 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 MAGEA3P43357 314 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 NCALDP61601 193 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 CYB5D1Q6P9G0 228 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 TRMT10BQ6PF06 316 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 UNC5AQ6ZN44 842 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 RGS9BPQ6ZS82 235 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 DENND5BQ6ZUT9 1274 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 BNIPLQ7Z465 357 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 CDKL3Q8IVW4 592 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 CTAGE3PQ8IX95 158 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 VPS52Q8N1B4 723 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 PPM1NQ8N819 430 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 LRRC8CQ8TDW0 803 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 PTPRN2Q92932 1015 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 NT5C3BQ969T7 300 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 SIGLEC10Q96LC7 697 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 OLFM3Q96PB7 478 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 QKIQ96PU8 341 aaKnown RBP eCLIP8.23□□□□□ -1.094e-9■■■■■ 33.7
PDLIM5-204ENST00000380176 APBA2Q99767 749 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 NCAPGQ9BPX3 1015 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 MED10Q9BTT4 135 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 RHOBTB2Q9BYZ6 727 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 ALG2Q9H553 416 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 ECT2Q9H8V3 914 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 SSU72Q9NP77 194 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 NMRK2Q9NPI5 230 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 KRT82Q9NSB4 513 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 PIGVQ9NUD9 493 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 KLHL14Q9P2G3 628 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 TRIM33Q9UPN9 1127 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 Q9Y3F1 56 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 STARD13Q9Y3M8 1113 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 YJEFN3A6XGL0 299 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 E7ENQ6 273 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 FAM72CH0Y354 149 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 I3L4J1 428 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 CREB3O43889 395 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 ZWINTO95229 277 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 PARNO95453 639 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 MT-ND3P03897 115 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 INHBAP08476 426 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 GNAT1P11488 350 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 NR2C2P49116 596 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 TKTL1P51854 596 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 KCNJ2P63252 427 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 BNIP1Q12981 228 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 FAM72AQ5TYM5 149 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 RNF43Q68DV7 783 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 HEATR6Q6AI08 1181 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 FAM72DQ6L9T8 149 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 OTOAQ7RTW8 1153 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 TBC1D1Q86TI0 1168 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 FAM72BQ86X60 149 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 UNC5BQ8IZJ1 945 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 ITFG2Q969R8 447 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 PCED1BQ96HM7 432 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 NPY6RQ99463 290 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 SMOQ99835 787 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 ARHGAP39Q9C0H5 1083 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 LRRC4Q9HBW1 653 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 RXFP1Q9HBX9 757 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 PNPLA8Q9NP80 782 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 MAD1L1Q9Y6D9 718 aa8.23□□□□□ -1.09
PDLIM5-204ENST00000380176 CASTOR2A6NHX0 329 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 LPXNO60711 386 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 DAB1O75553 588 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 AKR1A1P14550 325 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 NOS2P35228 1153 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 ARL4AP40617 200 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 SCNN1GP51170 649 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 CRADDP78560 199 aa8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 FOXD4Q12950 439 aaPredicted RBP8.22□□□□□ -1.09
PDLIM5-204ENST00000380176 CBLBQ13191 982 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms