RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 MMP17Q9ULZ9 603 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 SLC27A6Q9Y2P4 619 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 SLC30A4O14863 429 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 EPN2O95208 641 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 APBB3O95704 486 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 NCAM1P13591 858 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 ATP1A3P13637 1013 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 KRT9P35527 623 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 HARS2P49590 506 aaKnown RBP17.72■□□□□ 0.43
RER1-202ENST00000378512 ZNF445P59923 1031 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 YWHAZP63104 245 aaKnown RBP17.72■□□□□ 0.43
RER1-202ENST00000378512 KDSRQ06136 332 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 PLK5Q496M5 336 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 EMC10Q5UCC4 262 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 SYPL2Q5VXT5 272 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 TCEAL6Q6IPX3 200 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 ANKRD20A12PQ8NF67 263 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 NETO1Q8TDF5 533 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 EPS8L1Q8TE68 723 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 GOLGA1Q92805 767 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 TCEAL3Q969E4 200 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 DUSP15Q9H1R2 295 aaPredicted RBP17.72■□□□□ 0.43
RER1-202ENST00000378512 POPDC2Q9HBU9 364 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 DNAJC17Q9NVM6 304 aaKnown RBP17.72■□□□□ 0.43
RER1-202ENST00000378512 EBF1Q9UH73 591 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 NAALADL1Q9UQQ1 740 aa17.72■□□□□ 0.43
RER1-202ENST00000378512 LAMA1P25391 3075 aa17.71■□□□□ 0.43
RER1-202ENST00000378512 SDHBP21912 280 aa17.71■□□□□ 0.43
RER1-202ENST00000378512 GABRB2P47870 512 aa17.71■□□□□ 0.43
RER1-202ENST00000378512 DGKEP52429 567 aa17.71■□□□□ 0.43
RER1-202ENST00000378512 SYCP1Q15431 976 aa17.71■□□□□ 0.43
RER1-202ENST00000378512 PTPN20Q4JDL3 420 aa17.71■□□□□ 0.43
RER1-202ENST00000378512 ADGRF1Q5T601 910 aa17.71■□□□□ 0.43
RER1-202ENST00000378512 NUGGCQ68CJ6 796 aa17.71■□□□□ 0.43
RER1-202ENST00000378512 GRAMD4Q6IC98 578 aa17.71■□□□□ 0.43
RER1-202ENST00000378512 OLFML1Q6UWY5 402 aa17.71■□□□□ 0.43
RER1-202ENST00000378512 TMEM92Q6UXU6 159 aa17.71■□□□□ 0.43
RER1-202ENST00000378512 NOP9Q86U38 636 aaKnown RBP17.71■□□□□ 0.43
RER1-202ENST00000378512 PASD1Q8IV76 773 aa17.71■□□□□ 0.43
RER1-202ENST00000378512 UNC45BQ8IWX7 931 aa17.71■□□□□ 0.43
RER1-202ENST00000378512 C1orf131Q8NDD1 294 aaKnown RBP17.71■□□□□ 0.43
RER1-202ENST00000378512 FCRL2Q96LA5 508 aaPredicted RBP17.71■□□□□ 0.43
RER1-202ENST00000378512 SERPINB11Q96P15 392 aa17.71■□□□□ 0.43
RER1-202ENST00000378512 SLC2A13Q96QE2 648 aa17.71■□□□□ 0.43
RER1-202ENST00000378512 TLR6Q9Y2C9 796 aa17.71■□□□□ 0.43
RER1-202ENST00000378512 ADAM23O75077 832 aa17.7■□□□□ 0.42
RER1-202ENST00000378512 DGKGP49619 791 aa17.7■□□□□ 0.42
RER1-202ENST00000378512 POLR2FP61218 127 aaKnown RBP17.7■□□□□ 0.42
RER1-202ENST00000378512 IQCB1Q15051 598 aa17.7■□□□□ 0.42
RER1-202ENST00000378512 CRY1Q16526 586 aa17.7■□□□□ 0.42
RER1-202ENST00000378512 ANO7Q6IWH7 933 aa17.7■□□□□ 0.42
RER1-202ENST00000378512 TOGARAM2Q6ZUX3 1019 aa17.7■□□□□ 0.42
RER1-202ENST00000378512 NUDT18Q6ZVK8 323 aa17.7■□□□□ 0.42
RER1-202ENST00000378512 RASSF3Q86WH2 238 aa17.7■□□□□ 0.42
RER1-202ENST00000378512 ZNF677Q86XU0 584 aa17.7■□□□□ 0.42
RER1-202ENST00000378512 ALLCQ8N6M5 410 aa17.7■□□□□ 0.42
RER1-202ENST00000378512 ZNF397Q8NF99 534 aaPredicted RBP17.7■□□□□ 0.42
RER1-202ENST00000378512 TSTD1Q8NFU3 115 aa17.7■□□□□ 0.42
RER1-202ENST00000378512 FAM149B1Q96BN6 582 aa17.7■□□□□ 0.42
RER1-202ENST00000378512 ZC3H10Q96K80 434 aaKnown RBP17.7■□□□□ 0.42
RER1-202ENST00000378512 NOX5Q96PH1 765 aa17.7■□□□□ 0.42
RER1-202ENST00000378512 SLC2A11Q9BYW1 496 aa17.7■□□□□ 0.42
RER1-202ENST00000378512 FAM207AQ9NSI2 230 aaPredicted RBP17.7■□□□□ 0.42
RER1-202ENST00000378512 PLK2Q9NYY3 685 aa17.7■□□□□ 0.42
RER1-202ENST00000378512 NOCTQ9UK39 431 aaKnown RBP17.7■□□□□ 0.42
RER1-202ENST00000378512 MUC22E2RYF6 1773 aaPredicted RBP17.69■□□□□ 0.42
RER1-202ENST00000378512 TBC1D3BA6NDS4 549 aa17.69■□□□□ 0.42
RER1-202ENST00000378512 PRRT4C9JH25 899 aa17.69■□□□□ 0.42
RER1-202ENST00000378512 SGK1O00141 431 aa17.69■□□□□ 0.42
RER1-202ENST00000378512 ERBB2P04626 1255 aa17.69■□□□□ 0.42
RER1-202ENST00000378512 PTMSP20962 102 aa17.69■□□□□ 0.42
RER1-202ENST00000378512 CDK11BP21127 795 aaKnown RBP17.69■□□□□ 0.42
RER1-202ENST00000378512 BCKDHBP21953 392 aa17.69■□□□□ 0.42
RER1-202ENST00000378512 HOXD9P28356 352 aaPredicted RBP17.69■□□□□ 0.42
RER1-202ENST00000378512 TIE1P35590 1138 aa17.69■□□□□ 0.42
RER1-202ENST00000378512 ZNF165P49910 485 aa17.69■□□□□ 0.42
RER1-202ENST00000378512 TBX4P57082 545 aa17.69■□□□□ 0.42
RER1-202ENST00000378512 TAF5Q15542 800 aa17.69■□□□□ 0.42
RER1-202ENST00000378512 AASDHQ4L235 1098 aaPredicted RBP17.69■□□□□ 0.42
RER1-202ENST00000378512 MPPE1Q53F39 396 aa17.69■□□□□ 0.42
RER1-202ENST00000378512 FAM133BQ5BKY9 247 aaKnown RBP17.69■□□□□ 0.42
RER1-202ENST00000378512 PPM1JQ5JR12 505 aa17.69■□□□□ 0.42
RER1-202ENST00000378512 EFHC1Q5JVL4 640 aa17.69■□□□□ 0.42
RER1-202ENST00000378512 PLA2G2CQ5R387 149 aa17.69■□□□□ 0.42
RER1-202ENST00000378512 SLC26A9Q7LBE3 791 aa17.69■□□□□ 0.42
RER1-202ENST00000378512 TAC4Q86UU9 113 aa17.69■□□□□ 0.42
RER1-202ENST00000378512 ZDHHC17Q8IUH5 632 aa17.69■□□□□ 0.42
RER1-202ENST00000378512 TMEM35BQ8NCS4 154 aa17.69■□□□□ 0.42
RER1-202ENST00000378512 MDGA1Q8NFP4 955 aa17.69■□□□□ 0.42
RER1-202ENST00000378512 SMTNL1A8MU46 457 aa17.68■□□□□ 0.42
RER1-202ENST00000378512 IRAK2O43187 625 aa17.68■□□□□ 0.42
RER1-202ENST00000378512 ACSL4O60488 711 aa17.68■□□□□ 0.42
RER1-202ENST00000378512 HSF2BPO75031 334 aa17.68■□□□□ 0.42
RER1-202ENST00000378512 LSM8O95777 96 aaKnown RBP17.68■□□□□ 0.42
RER1-202ENST00000378512 ZNF806P0C7X5 589 aa17.68■□□□□ 0.42
RER1-202ENST00000378512 KCNA4P22459 653 aa17.68■□□□□ 0.42
RER1-202ENST00000378512 SOX5P35711 763 aa17.68■□□□□ 0.42
RER1-202ENST00000378512 SCNN1AP37088 669 aa17.68■□□□□ 0.42
RER1-202ENST00000378512 MPLP40238 635 aa17.68■□□□□ 0.42
RER1-202ENST00000378512 SNX16P57768 344 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms