RNA–Protein interactions for RNA: ENST00000378152.8

ARHGEF1-204, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-204ENST00000378152 TRIM50Q86XT4 487 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 HPS6Q86YV9 775 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 ZBTB8OSQ8IWT0 167 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 C1orf127Q8N9H9 656 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 INO80BQ9C086 356 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 KLHL4Q9C0H6 718 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 PCDH18Q9HCL0 1135 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 IL1RAPL1Q9NZN1 696 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 WDR27A2RRH5 827 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 TPP1O14773 563 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 UBA1P22314 1058 aaKnown RBP16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 OAZ1P54368 228 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 BSPRYQ5W0U4 402 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 MAP1SQ66K74 1059 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 AAGABQ6PD74 315 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 DEFB107AQ8IZN7 70 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 ARHGAP18Q8N392 663 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 RAB3IL1Q8TBN0 382 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 KCNN1Q92952 543 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 BCO2Q9BYV7 579 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 FRMD8Q9BZ67 464 aaPredicted RBP16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 PCDHA11Q9Y5I1 949 aa16.5■□□□□ 0.23
ARHGEF1-204ENST00000378152 MGAMO43451 1857 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 A6NJR5 290 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 MAFO75444 373 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 CSDE1O75534 798 aaKnown RBP16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 GABRB2P47870 512 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 GBE1Q04446 702 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 DYNC1I2Q13409 638 aaKnown RBP16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 CCDC14Q49A88 953 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 PRAMEF18Q5VWM3 479 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 C10orf107Q8IVU9 208 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 SNRNP25Q9BV90 132 aaKnown RBP16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 BTBD7Q9P203 1132 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 CDH22Q9UJ99 828 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 CILPO75339 1184 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 USP2O75604 605 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 UQCRBP14927 111 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 RAG1P15918 1043 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 CYP3A5P20815 502 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 TCF7P36402 384 aaPredicted RBP16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 IDH3AP50213 366 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 CDK18Q07002 472 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 MMEL1Q495T6 779 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 PPM1JQ5JR12 505 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 ATF7IP2Q5U623 682 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 MPZL3Q6UWV2 235 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 SESTD1Q86VW0 696 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 NETO2Q8NC67 525 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 TRAPPC12Q8WVT3 735 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 RTP4Q96DX8 246 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 OCEL1Q9H607 264 aa16.49■□□□□ 0.23
ARHGEF1-204ENST00000378152 BCLAF3A2AJT9 711 aaKnown RBP16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 KLHL2O95198 593 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 ALDOAP04075 364 aaKnown RBP16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 VCLP18206 1134 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 ARRB2P32121 409 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 HNRNPDQ14103 355 aaKnown RBP16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 PDE1CQ14123 709 aaPredicted RBP16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 GRAMD1BQ3KR37 738 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 PDPK2PQ6A1A2 396 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 SATL1Q86VE3 508 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 C12orf29Q8N999 325 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 NDNQ99608 321 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 TEX13BQ9BXU2 312 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 UBE2OQ9C0C9 1292 aaKnown RBP16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 RPF1Q9H9Y2 349 aaKnown RBP16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 B4GALT4O60513 344 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 OR6B1O95007 311 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 SPATA31D3P0C874 917 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 TGM2P21980 687 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 SERPINB9P50453 376 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 SLC10A2Q12908 348 aaPredicted RBP16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 C9orf131Q5VYM1 1079 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 SPATA31D4Q6ZUB0 917 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 PHTF2Q8N3S3 785 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 APBB2Q92870 758 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 LRRC39Q96DD0 335 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 IFT122Q9HBG6 1241 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 MAN1C1Q9NR34 630 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 POMPQ9Y244 141 aa16.48■□□□□ 0.23
ARHGEF1-204ENST00000378152 CCNT2O60583 730 aaKnown RBP16.47■□□□□ 0.23
ARHGEF1-204ENST00000378152 FARP2O94887 1054 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF1-204ENST00000378152 F7P08709 466 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF1-204ENST00000378152 TFE3P19532 575 aaPredicted RBP16.47■□□□□ 0.23
ARHGEF1-204ENST00000378152 PCLAFQ15004 111 aa16.47■□□□□ 0.23
ARHGEF1-204ENST00000378152 CLMNQ96JQ2 1002 aa16.47■□□□□ 0.23
ARHGEF1-204ENST00000378152 PPP1R16BQ96T49 567 aa16.47■□□□□ 0.23
ARHGEF1-204ENST00000378152 VCX3BQ9H321 246 aa16.47■□□□□ 0.23
ARHGEF1-204ENST00000378152 RNPEPQ9H4A4 650 aa16.47■□□□□ 0.23
ARHGEF1-204ENST00000378152 VCX3AQ9NNX9 186 aa16.47■□□□□ 0.23
ARHGEF1-204ENST00000378152 XPNPEP3Q9NQH7 507 aa16.47■□□□□ 0.23
ARHGEF1-204ENST00000378152 ZNF358Q9NW07 568 aa16.47■□□□□ 0.23
ARHGEF1-204ENST00000378152 PSAT1Q9Y617 370 aa16.47■□□□□ 0.23
ARHGEF1-204ENST00000378152 IGKV6D-21A0A0A0MT36 114 aa16.47■□□□□ 0.23
ARHGEF1-204ENST00000378152 LACTBL1A8MY62 500 aa16.47■□□□□ 0.23
ARHGEF1-204ENST00000378152 PGM3O95394 542 aa16.47■□□□□ 0.23
ARHGEF1-204ENST00000378152 ITGAXP20702 1163 aa16.47■□□□□ 0.23
ARHGEF1-204ENST00000378152 L1CAMP32004 1257 aa16.47■□□□□ 0.23
ARHGEF1-204ENST00000378152 ATXN1P54253 815 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms