RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 BRMS1LQ5PSV4 323 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 CCDC122Q5T0U0 273 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 ACBD5Q5T8D3 534 aaPredicted RBP13.76□□□□□ -0.21
CKAP2-202ENST00000378034 ASTLQ6HA08 431 aaPredicted RBP13.76□□□□□ -0.21
CKAP2-202ENST00000378034 PHLDB2Q86SQ0 1253 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 TMEM25Q86YD3 366 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 SUGP1Q8IWZ8 645 aaKnown RBP13.76□□□□□ -0.21
CKAP2-202ENST00000378034 RXFP2Q8WXD0 754 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 RNF34Q969K3 372 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 NHEJ1Q9H9Q4 299 aaPredicted RBP13.76□□□□□ -0.21
CKAP2-202ENST00000378034 MRPL47Q9HD33 250 aaKnown RBP13.76□□□□□ -0.21
CKAP2-202ENST00000378034 LTB4R2Q9NPC1 389 aa13.76□□□□□ -0.21
CKAP2-202ENST00000378034 COL4A3Q01955 1670 aa13.75□□□□□ -0.21
CKAP2-202ENST00000378034 KCNU1A8MYU2 1149 aa13.75□□□□□ -0.21
CKAP2-202ENST00000378034 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.75□□□□□ -0.21
CKAP2-202ENST00000378034 AKR1B10O60218 316 aa13.75□□□□□ -0.21
CKAP2-202ENST00000378034 DESP17661 470 aa13.75□□□□□ -0.21
CKAP2-202ENST00000378034 GPD1P21695 349 aa13.75□□□□□ -0.21
CKAP2-202ENST00000378034 RDXP35241 583 aaKnown RBP13.75□□□□□ -0.21
CKAP2-202ENST00000378034 RFC1P35251 1148 aaPredicted RBP13.75□□□□□ -0.21
CKAP2-202ENST00000378034 NME3Q13232 169 aa13.75□□□□□ -0.21
CKAP2-202ENST00000378034 MAMLD1Q13495 774 aa13.75□□□□□ -0.21
CKAP2-202ENST00000378034 OTUD1Q5VV17 481 aaPredicted RBP13.75□□□□□ -0.21
CKAP2-202ENST00000378034 TRNP1Q6NT89 227 aa13.75□□□□□ -0.21
CKAP2-202ENST00000378034 DCUN1D2Q6PH85 259 aa13.75□□□□□ -0.21
CKAP2-202ENST00000378034 STRADAQ7RTN6 431 aa13.75□□□□□ -0.21
CKAP2-202ENST00000378034 EMC1Q8N766 993 aa13.75□□□□□ -0.21
CKAP2-202ENST00000378034 FLCNQ8NFG4 579 aa13.75□□□□□ -0.21
CKAP2-202ENST00000378034 PJA1Q8NG27 643 aa13.75□□□□□ -0.21
CKAP2-202ENST00000378034 JOSD2Q8TAC2 188 aa13.75□□□□□ -0.21
CKAP2-202ENST00000378034 ZNF653Q96CK0 615 aa13.75□□□□□ -0.21
CKAP2-202ENST00000378034 CFAP57Q96MR6 1250 aa13.75□□□□□ -0.21
CKAP2-202ENST00000378034 TBCBQ99426 244 aa13.75□□□□□ -0.21
CKAP2-202ENST00000378034 CHP1Q99653 195 aa13.75□□□□□ -0.21
CKAP2-202ENST00000378034 P2RY13Q9BPV8 354 aa13.75□□□□□ -0.21
CKAP2-202ENST00000378034 CNOT8Q9UFF9 292 aaKnown RBP13.75□□□□□ -0.21
CKAP2-202ENST00000378034 SIT1Q9Y3P8 196 aa13.75□□□□□ -0.21
CKAP2-202ENST00000378034 TRIOO75962 3097 aa13.75□□□□□ -0.21
CKAP2-202ENST00000378034 FAM86C2PA6NEL3 165 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 GOLGA6L6A8MZA4 724 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 GFRA2O00451 464 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 PDGFBP01127 241 aaPredicted RBP13.74□□□□□ -0.21
CKAP2-202ENST00000378034 PENKP01210 267 aaPredicted RBP13.74□□□□□ -0.21
CKAP2-202ENST00000378034 AOC1P19801 751 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 MAGEA9P43362 315 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 ZNF143P52747 638 aaPredicted RBP13.74□□□□□ -0.21
CKAP2-202ENST00000378034 GAB4Q2WGN9 574 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 ANO4Q32M45 955 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 CCDC14Q49A88 953 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 MPPE1Q53F39 396 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 CWF19L1Q69YN2 538 aaKnown RBP13.74□□□□□ -0.21
CKAP2-202ENST00000378034 ZNF687Q8N1G0 1237 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 CENPIQ92674 756 aaPredicted RBP13.74□□□□□ -0.21
CKAP2-202ENST00000378034 CD101Q93033 1021 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 CHFRQ96EP1 664 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 MCEEQ96PE7 176 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 XPO6Q96QU8 1125 aaKnown RBP13.74□□□□□ -0.21
CKAP2-202ENST00000378034 BBS2Q9BXC9 721 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 WDCPQ9H6R7 721 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 PIGVQ9NUD9 493 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 SYNJ2BP-COX16A0A087WUM0 186 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 FAM170BA6NMN3 283 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 CACNG3O60359 315 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 DRD1P21728 446 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 CD72P21854 359 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 GFPT1Q06210 699 aaPredicted RBP13.74□□□□□ -0.21
CKAP2-202ENST00000378034 GRSF1Q12849 480 aaKnown RBP eCLIP13.74□□□□□ -0.21
CKAP2-202ENST00000378034 UBXN2BQ14CS0 331 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 TMEM196Q5HYL7 178 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 DGKKQ5KSL6 1271 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 MPP7Q5T2T1 576 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 TXNDC11Q6PKC3 985 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 TPGS1Q6ZTW0 290 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 ETFBKMTQ8IXQ9 262 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 SYNPOQ8N3V7 929 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 FNIP1Q8TF40 1166 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 CNPY3Q9BT09 278 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 ARHGEF38Q9NXL2 777 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 COX16Q9P0S2 106 aa13.74□□□□□ -0.21
CKAP2-202ENST00000378034 GOLGA6L3A6NEY3 463 aa13.73□□□□□ -0.21
CKAP2-202ENST00000378034 TMEM191CA6NGB0 347 aa13.73□□□□□ -0.21
CKAP2-202ENST00000378034 NEDD8-MDP1E9PL57 170 aa13.73□□□□□ -0.21
CKAP2-202ENST00000378034 GJB6O95452 261 aa13.73□□□□□ -0.21
CKAP2-202ENST00000378034 MOCS2O96007 188 aaPredicted RBP13.73□□□□□ -0.21
CKAP2-202ENST00000378034 TYRP14679 529 aa13.73□□□□□ -0.21
CKAP2-202ENST00000378034 TFE3P19532 575 aaPredicted RBP13.73□□□□□ -0.21
CKAP2-202ENST00000378034 FECHP22830 423 aa13.73□□□□□ -0.21
CKAP2-202ENST00000378034 TARSP26639 723 aaKnown RBP13.73□□□□□ -0.21
CKAP2-202ENST00000378034 OPRD1P41143 372 aa13.73□□□□□ -0.21
CKAP2-202ENST00000378034 RPS9P46781 194 aaKnown RBP13.73□□□□□ -0.21
CKAP2-202ENST00000378034 GALK1P51570 392 aa13.73□□□□□ -0.21
CKAP2-202ENST00000378034 RPL7AP62424 266 aaKnown RBP13.73□□□□□ -0.21
CKAP2-202ENST00000378034 LRRC32Q14392 662 aa13.73□□□□□ -0.21
CKAP2-202ENST00000378034 PON2Q15165 354 aa13.73□□□□□ -0.21
CKAP2-202ENST00000378034 FAM133BQ5BKY9 247 aaKnown RBP13.73□□□□□ -0.21
CKAP2-202ENST00000378034 C10orf76Q5T2E6 689 aa13.73□□□□□ -0.21
CKAP2-202ENST00000378034 FYB2Q5VWT5 728 aa13.73□□□□□ -0.21
CKAP2-202ENST00000378034 CCDC170Q8IYT3 715 aa13.73□□□□□ -0.21
CKAP2-202ENST00000378034 CCDC26Q8TAB7 109 aa13.73□□□□□ -0.21
CKAP2-202ENST00000378034 CLDN23Q96B33 292 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms