RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 CASC4Q6P4E1 433 aa13.64□□□□□ -0.23
ACTN1-202ENST00000376839 TIFABQ6ZNK6 161 aa13.64□□□□□ -0.23
ACTN1-202ENST00000376839 MAVSQ7Z434 540 aa13.64□□□□□ -0.23
ACTN1-202ENST00000376839 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.64□□□□□ -0.23
ACTN1-202ENST00000376839 MRPL45Q9BRJ2 306 aaKnown RBP13.64□□□□□ -0.23
ACTN1-202ENST00000376839 MTMR10Q9NXD2 777 aa13.64□□□□□ -0.23
ACTN1-202ENST00000376839 NDE1Q9NXR1 346 aa13.64□□□□□ -0.23
ACTN1-202ENST00000376839 DPP3Q9NY33 737 aa13.64□□□□□ -0.23
ACTN1-202ENST00000376839 HESX1Q9UBX0 185 aa13.64□□□□□ -0.23
ACTN1-202ENST00000376839 AOC1P19801 751 aa13.64□□□□□ -0.23
ACTN1-202ENST00000376839 PDE1CQ14123 709 aaPredicted RBP13.64□□□□□ -0.23
ACTN1-202ENST00000376839 NOL9Q5SY16 702 aaKnown RBP13.64□□□□□ -0.23
ACTN1-202ENST00000376839 APOBEC3FQ8IUX4 373 aaKnown RBP13.64□□□□□ -0.23
ACTN1-202ENST00000376839 CCNJLQ8IV13 435 aa13.64□□□□□ -0.23
ACTN1-202ENST00000376839 SLC4A5Q9BY07 1137 aa13.64□□□□□ -0.23
ACTN1-202ENST00000376839 IL1RAPL1Q9NZN1 696 aa13.64□□□□□ -0.23
ACTN1-202ENST00000376839 PSAT1Q9Y617 370 aa13.64□□□□□ -0.23
ACTN1-202ENST00000376839 MCM3APO60318 1980 aa13.64□□□□□ -0.23
ACTN1-202ENST00000376839 MAGEA13PA6NCF6 341 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 PPEF2O14830 753 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 HCRTO43612 131 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 HBP1O60381 514 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 SORBS2O94875 1100 aaKnown RBP13.63□□□□□ -0.23
ACTN1-202ENST00000376839 VTNP04004 478 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 ARRB2P32121 409 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 PHKA2P46019 1235 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 AP2B1P63010 937 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 RBP5P82980 135 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 SATB1Q01826 763 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 SEMA5AQ13591 1074 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 VGLL4Q14135 290 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 TBCCQ15814 346 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 RALGPS1Q5JS13 557 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 C6orf163Q5TEZ5 329 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 SLC30A9Q6PML9 568 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 KYAT3Q6YP21 454 aaKnown RBP13.63□□□□□ -0.23
ACTN1-202ENST00000376839 RSPH3Q86UC2 560 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 APLFQ8IW19 511 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-202ENST00000376839 PIWIL2Q8TC59 973 aaKnown RBP13.63□□□□□ -0.23
ACTN1-202ENST00000376839 QKIQ96PU8 341 aaKnown RBP eCLIP13.63□□□□□ -0.23
ACTN1-202ENST00000376839 KCTD15Q96SI1 283 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-202ENST00000376839 SHCBP1LQ9BZQ2 653 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 PAPOLBQ9NRJ5 636 aaKnown RBP13.63□□□□□ -0.23
ACTN1-202ENST00000376839 DTLQ9NZJ0 730 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 SOX13Q9UN79 622 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 PRKCGP05129 697 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 ZCCHC18P0CG32 403 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 SLC1A6P48664 564 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 TNFAIP2Q03169 654 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 CDC16Q13042 620 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 DPYSL2Q16555 572 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 DPY19L2Q6NUT2 758 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 PAXIP1Q6ZW49 1069 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-202ENST00000376839 RAPH1Q70E73 1250 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 TMEM110Q86TL2 294 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 WDR75Q8IWA0 830 aaKnown RBP13.63□□□□□ -0.23
ACTN1-202ENST00000376839 PYROXD2Q8N2H3 581 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 CCDC185Q8N715 623 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 SLC35F5Q8WV83 523 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 CLMNQ96JQ2 1002 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 PGLYRP2Q96PD5 576 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 CSPG4P5Q96PW8 444 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 ECSITQ9BQ95 431 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 C1orf21Q9H246 121 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 SMARCAD1Q9H4L7 1026 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 XPNPEP3Q9NQH7 507 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 PDGFCQ9NRA1 345 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 DDX43Q9NXZ2 648 aaKnown RBP13.63□□□□□ -0.23
ACTN1-202ENST00000376839 ITGA11Q9UKX5 1188 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 AP4E1Q9UPM8 1137 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 SCN1AP35498 2009 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 E2F8A0AVK6 867 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 PLIN3O60664 434 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 MYCNP04198 464 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-202ENST00000376839 SESN2P58004 480 aaPredicted RBP13.63□□□□□ -0.23
ACTN1-202ENST00000376839 DSG1Q02413 1049 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 NIPAL4Q0D2K0 466 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 PCLAFQ15004 111 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 STEAP4Q687X5 459 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 NCBP2-AS2Q69YL0 99 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 HEATR6Q6AI08 1181 aaKnown RBP13.63□□□□□ -0.23
ACTN1-202ENST00000376839 PACS1Q6VY07 963 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 MARK2Q7KZI7 788 aaKnown RBP13.63□□□□□ -0.23
ACTN1-202ENST00000376839 PYDC1Q8WXC3 89 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 KIF12Q96FN5 646 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 LGMNQ99538 433 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 NFKBIZQ9BYH8 718 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 CEP41Q9BYV8 373 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 PNPOQ9NVS9 261 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 KIAA1257Q9ULG3 409 aa13.63□□□□□ -0.23
ACTN1-202ENST00000376839 ARHGAP42A6NI28 874 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 A6NJR5 290 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 INSRRP14616 1297 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 PAPOLAP51003 745 aaKnown RBP13.62□□□□□ -0.23
ACTN1-202ENST00000376839 FAM187BQ17R55 369 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 PPM1JQ5JR12 505 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 GJC2Q5T442 439 aaPredicted RBP13.62□□□□□ -0.23
ACTN1-202ENST00000376839 VWA5B1Q5TIE3 1220 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 BSPRYQ5W0U4 402 aa13.62□□□□□ -0.23
ACTN1-202ENST00000376839 C4orf22Q6V702 233 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms