RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 MAGEA4P43358 317 aa18.29■□□□□ 0.52
CTTN-203ENST00000376561 SMARCB1Q12824 385 aa18.29■□□□□ 0.52
CTTN-203ENST00000376561 PRSS55Q6UWB4 352 aaPredicted RBP18.29■□□□□ 0.52
CTTN-203ENST00000376561 RNF19BQ6ZMZ0 732 aa18.29■□□□□ 0.52
CTTN-203ENST00000376561 MON1AQ86VX9 555 aa18.29■□□□□ 0.52
CTTN-203ENST00000376561 RNF34Q969K3 372 aa18.29■□□□□ 0.52
CTTN-203ENST00000376561 TOP1MTQ969P6 601 aa18.29■□□□□ 0.52
CTTN-203ENST00000376561 C9orf72Q96LT7 481 aa18.29■□□□□ 0.52
CTTN-203ENST00000376561 QKIQ96PU8 341 aaKnown RBP eCLIP18.29■□□□□ 0.52
CTTN-203ENST00000376561 TMEM109Q9BVC6 243 aa18.29■□□□□ 0.52
CTTN-203ENST00000376561 SMOC2Q9H3U7 446 aa18.29■□□□□ 0.52
CTTN-203ENST00000376561 SAYSD1Q9NPB0 183 aa18.29■□□□□ 0.52
CTTN-203ENST00000376561 SLC27A5Q9Y2P5 690 aa18.29■□□□□ 0.52
CTTN-203ENST00000376561 ABHD14A-ACY1A0A1B0GW23 586 aa18.28■□□□□ 0.52
CTTN-203ENST00000376561 GOLGA8MH3BSY2 632 aa18.28■□□□□ 0.52
CTTN-203ENST00000376561 SMAPO00193 183 aa18.28■□□□□ 0.52
CTTN-203ENST00000376561 DCLK1O15075 740 aa18.28■□□□□ 0.52
CTTN-203ENST00000376561 VNN2O95498 520 aa18.28■□□□□ 0.52
CTTN-203ENST00000376561 HCAR3P49019 387 aa18.28■□□□□ 0.52
CTTN-203ENST00000376561 TPI1P60174 286 aa18.28■□□□□ 0.52
CTTN-203ENST00000376561 USP46P62068 366 aa18.28■□□□□ 0.52
CTTN-203ENST00000376561 PAFAH1B3Q15102 231 aaKnown RBP18.28■□□□□ 0.52
CTTN-203ENST00000376561 FAM182AQ5T1J6 154 aa18.28■□□□□ 0.52
CTTN-203ENST00000376561 AGBL2Q5U5Z8 902 aa18.28■□□□□ 0.52
CTTN-203ENST00000376561 CASP10Q92851 521 aa18.28■□□□□ 0.52
CTTN-203ENST00000376561 CRISPLD1Q9H336 500 aa18.28■□□□□ 0.52
CTTN-203ENST00000376561 OSER1Q9NX31 292 aa18.28■□□□□ 0.52
CTTN-203ENST00000376561 IL37Q9NZH6 218 aa18.28■□□□□ 0.52
CTTN-203ENST00000376561 BCCIPQ9P287 314 aaKnown RBP eCLIP18.28■□□□□ 0.52
CTTN-203ENST00000376561 KIAA0100Q14667 2235 aaKnown RBP18.28■□□□□ 0.52
CTTN-203ENST00000376561 TCRBV7S3A2A0A539 114 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 SOAT2O75908 522 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 TIMP1P01033 207 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 HSPA8P11142 646 aaKnown RBP18.27■□□□□ 0.52
CTTN-203ENST00000376561 ERCC2P18074 760 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 GAD2Q05329 585 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 PKN2Q16513 984 aaKnown RBP18.27■□□□□ 0.52
CTTN-203ENST00000376561 MGAT5BQ3V5L5 792 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 CENPUQ71F23 418 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 DNAJC5GQ8N7S2 189 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 GPR152Q8TDT2 470 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 IGSF21Q96ID5 467 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 OR12D3Q9UGF7 316 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 SFMBT1Q9UHJ3 866 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 HACD1B0YJ81 288 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 TMEM63AO94886 807 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 CSF2RAP15509 400 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 ZNF135P52742 658 aaPredicted RBP18.27■□□□□ 0.52
CTTN-203ENST00000376561 HIF1AQ16665 826 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 USP41Q3LFD5 358 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 DENND5BQ6ZUT9 1274 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 CROCCP2Q86T23 111 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 TFB1MQ8WVM0 346 aaKnown RBP18.27■□□□□ 0.52
CTTN-203ENST00000376561 EPAS1Q99814 870 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 PRDM5Q9NQX1 630 aaPredicted RBP18.27■□□□□ 0.52
CTTN-203ENST00000376561 RAB6BQ9NRW1 208 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 ARHGEF38Q9NXL2 777 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 XPO7Q9UIA9 1087 aaKnown RBP18.27■□□□□ 0.52
CTTN-203ENST00000376561 NUDT5Q9UKK9 219 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 CDY1Q9Y6F8 540 aa18.27■□□□□ 0.52
CTTN-203ENST00000376561 TLDC2A0PJX2 215 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 FAM92AA1XBS5 289 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 TRIM43BA6NCK2 446 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 FASTKD3Q14CZ7 662 aaKnown RBP18.26■□□□□ 0.51
CTTN-203ENST00000376561 DNAJC21Q5F1R6 531 aaKnown RBP18.26■□□□□ 0.51
CTTN-203ENST00000376561 BRMS1LQ5PSV4 323 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 HEATR6Q6AI08 1181 aaKnown RBP18.26■□□□□ 0.51
CTTN-203ENST00000376561 RNF168Q8IYW5 571 aaPredicted RBP18.26■□□□□ 0.51
CTTN-203ENST00000376561 FBXO22Q8NEZ5 403 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 CCDC110Q8TBZ0 833 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 EPS8L3Q8TE67 593 aaKnown RBP18.26■□□□□ 0.51
CTTN-203ENST00000376561 C2orf15Q8WU43 125 aaKnown RBP18.26■□□□□ 0.51
CTTN-203ENST00000376561 TRIM43Q96BQ3 446 aaPredicted RBP18.26■□□□□ 0.51
CTTN-203ENST00000376561 ZNF689Q96CS4 500 aaPredicted RBP18.26■□□□□ 0.51
CTTN-203ENST00000376561 SEPT5Q99719 369 aaPredicted RBP18.26■□□□□ 0.51
CTTN-203ENST00000376561 VN1R3Q9BXE9 311 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 PHACTR1Q9C0D0 580 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 PSD3Q9NYI0 1048 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 SNX10Q9Y5X0 201 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 ALOX15BO15296 676 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 MSI1O43347 362 aaKnown RBP18.26■□□□□ 0.51
CTTN-203ENST00000376561 GCATO75600 419 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 LRIG2O94898 1065 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 HAPLN1P10915 354 aaPredicted RBP18.26■□□□□ 0.51
CTTN-203ENST00000376561 YWHAQP27348 245 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 ARL4CP56559 192 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 DEFB103AP81534 67 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 PDIA2Q13087 525 aaKnown RBP18.26■□□□□ 0.51
CTTN-203ENST00000376561 DUSP4Q13115 394 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 KCNJ11Q14654 390 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 TMCO2Q7Z6W1 182 aaPredicted RBP18.26■□□□□ 0.51
CTTN-203ENST00000376561 ARHGAP18Q8N392 663 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 NETO2Q8NC67 525 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 PGM2Q96G03 612 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 LGMNQ99538 433 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 ROPN1BQ9BZX4 212 aaPredicted RBP18.26■□□□□ 0.51
CTTN-203ENST00000376561 OSBPL2Q9H1P3 480 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 ROPN1Q9HAT0 212 aaPredicted RBP18.26■□□□□ 0.51
CTTN-203ENST00000376561 PRDM10Q9NQV6 1147 aa18.26■□□□□ 0.51
CTTN-203ENST00000376561 GMIPQ9P107 970 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms