RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 SCN4AP35499 1836 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 SPDYE5A6NIY4 337 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 B2RBV5 119 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 PPEF2O14830 753 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 PRKCGP05129 697 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 CYP2C8P10632 490 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 VAV1P15498 845 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 DESP17661 470 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 CPOXP36551 454 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 PGM1P36871 562 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 AQP5P55064 265 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 MROH9Q5TGP6 573 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 IRGCQ6NXR0 463 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 LRRC74BQ6ZQY2 392 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 ZNF410Q86VK4 478 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 PSTKQ8IV42 348 aaKnown RBP11.01□□□□□ -0.65
ABCF1-202ENST00000376545 LMNTD2Q8IXW0 634 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 C7orf31Q8N865 590 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 RBM15BQ8NDT2 890 aaKnown RBP11.01□□□□□ -0.65
ABCF1-202ENST00000376545 SMC1BQ8NDV3 1235 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 LRRN4Q8WUT4 740 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 SPDL1Q96EA4 605 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 SNX27Q96L92 541 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 PCMTD2Q9NV79 361 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 AP4E1Q9UPM8 1137 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 AKT3Q9Y243 479 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 SF3B1O75533 1304 aaKnown RBP eCLIP11.01□□□□□ -0.652e-6■■■■■ 102.7
ABCF1-202ENST00000376545 A0A0A0MRY4 1105 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 UNCXA6NJT0 531 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 CAPN9O14815 690 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 ALDOAP04075 364 aaKnown RBP11.01□□□□□ -0.65
ABCF1-202ENST00000376545 FGF3P11487 239 aaPredicted RBP11.01□□□□□ -0.65
ABCF1-202ENST00000376545 HOXA11P31270 313 aaPredicted RBP11.01□□□□□ -0.65
ABCF1-202ENST00000376545 ATXN1P54253 815 aaKnown RBP11.01□□□□□ -0.65
ABCF1-202ENST00000376545 SOWAHAQ2M3V2 549 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 PPP6R3Q5H9R7 873 aaPredicted RBP11.01□□□□□ -0.65
ABCF1-202ENST00000376545 RABGAP1LQ5R372 815 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 ARMCX2Q7L311 632 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 MYLK4Q86YV6 388 aaPredicted RBP11.01□□□□□ -0.65
ABCF1-202ENST00000376545 CCNJLQ8IV13 435 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 ANKRD52Q8NB46 1076 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 OR6Y1Q8NGX8 325 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 CLEC4CQ8WTT0 213 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 HTR3CQ8WXA8 447 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 SPATA13Q96N96 652 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 FAM167BQ9BTA0 163 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 KATNBL1Q9H079 304 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.01□□□□□ -0.658e-7■■■■■ 40.9
ABCF1-202ENST00000376545 DDX43Q9NXZ2 648 aaKnown RBP11.01□□□□□ -0.65
ABCF1-202ENST00000376545 LRCH1Q9Y2L9 728 aa11.01□□□□□ -0.65
ABCF1-202ENST00000376545 DCAF8L1A6NGE4 600 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 HOXD8P13378 290 aaPredicted RBP11□□□□□ -0.65
ABCF1-202ENST00000376545 ALOX15P16050 662 aaPredicted RBP11□□□□□ -0.65
ABCF1-202ENST00000376545 BST2Q10589 180 aaKnown RBP11□□□□□ -0.65
ABCF1-202ENST00000376545 STX3Q13277 289 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 INSCQ1MX18 579 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 TEDDM1Q5T9Z0 273 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 CCDC185Q8N715 623 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 SCG3Q8WXD2 468 aaKnown RBP11□□□□□ -0.65
ABCF1-202ENST00000376545 ISL2Q96A47 359 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 ELP3Q9H9T3 547 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 FZD10Q9ULW2 581 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 SNX9Q9Y5X1 595 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 DPPA5A6NC42 116 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 A6NJR5 290 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 AMPD1P23109 780 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 ADORA2AP29274 412 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 MAGEA12P43365 314 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 GLUD2P49448 558 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 ACTR3P61158 418 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 SARNPP82979 210 aaKnown RBP11□□□□□ -0.65
ABCF1-202ENST00000376545 KLC1Q07866 573 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 ZNF792Q3KQV3 632 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 DNAL1Q4LDG9 190 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 HEATR6Q6AI08 1181 aaKnown RBP11□□□□□ -0.65
ABCF1-202ENST00000376545 MICAL1Q8TDZ2 1067 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 DEPDC1BQ8WUY9 529 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 TFB1MQ8WVM0 346 aaKnown RBP11□□□□□ -0.65
ABCF1-202ENST00000376545 KBTBD7Q8WVZ9 684 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 NT5C3BQ969T7 300 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 OTUD5Q96G74 571 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 SGIP1Q9BQI5 828 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 DHX35Q9H5Z1 703 aaKnown RBP11□□□□□ -0.65
ABCF1-202ENST00000376545 KRT82Q9NSB4 513 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 FAM49BQ9NUQ9 324 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 GJD2Q9UKL4 321 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 SEC23IPQ9Y6Y8 1000 aaKnown RBP11□□□□□ -0.65
ABCF1-202ENST00000376545 SRCAPQ6ZRS2 3230 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 UTRNP46939 3433 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 GLRA3O75311 464 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 SKAP2O75563 359 aaPredicted RBP11□□□□□ -0.65
ABCF1-202ENST00000376545 NPTXRO95502 500 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 ENO1P06733 434 aaKnown RBP11□□□□□ -0.65
ABCF1-202ENST00000376545 PPIL2Q13356 520 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 PDE1CQ14123 709 aaPredicted RBP11□□□□□ -0.65
ABCF1-202ENST00000376545 MUM1Q2TAK8 710 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 TRMT5Q32P41 509 aaKnown RBP11□□□□□ -0.65
ABCF1-202ENST00000376545 FASTKD1Q53R41 847 aaKnown RBP11□□□□□ -0.65
ABCF1-202ENST00000376545 TRIM68Q6AZZ1 485 aa11□□□□□ -0.65
ABCF1-202ENST00000376545 PACS1Q6VY07 963 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms