RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 TSHRP16473 764 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 PTPN1P18031 435 aaKnown RBP14.45□□□□□ -0.1
MSH5-202ENST00000375740 MATKP42679 507 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 RANBP1P43487 201 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 ADIGQ0VDE8 80 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 PAQR9Q6ZVX9 377 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 IFNL1Q8IU54 200 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 PYROXD2Q8N2H3 581 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 AGGF1Q8N302 714 aaeCLIP14.45□□□□□ -0.16e-11■■□□□ 13.8
MSH5-202ENST00000375740 TRPV1Q8NER1 839 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 CCDC110Q8TBZ0 833 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 DCAKDQ8WVC6 231 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 OCEL1Q9H607 264 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 ETNK2Q9NVF9 386 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 CDY2AQ9Y6F7 541 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 KRT4P19013 534 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 CA4P22748 312 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 AMPD1P23109 780 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 SLC18A1P54219 525 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 MRPS6P82932 125 aaKnown RBP14.45□□□□□ -0.1
MSH5-202ENST00000375740 GNASQ5JWF2 1037 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 TAF2Q6P1X5 1199 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 ZFAND2BQ8WV99 257 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 FAM149B1Q96BN6 582 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 IFT43Q96FT9 208 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 CSPG4P5Q96PW8 444 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 TRIM4Q9C037 500 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 LRMDAQ9H2I8 198 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 NMRK1Q9NWW6 199 aa14.45□□□□□ -0.1
MSH5-202ENST00000375740 KBTBD13C9JR72 458 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 TYROBPO43914 113 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 CTGFP29279 349 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 SKIV2L2P42285 1042 aaKnown RBP14.44□□□□□ -0.1
MSH5-202ENST00000375740 NDUFV1P49821 464 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 AFF1P51825 1210 aaKnown RBP14.44□□□□□ -0.1
MSH5-202ENST00000375740 YWHAGP61981 247 aaKnown RBP eCLIP14.44□□□□□ -0.1
MSH5-202ENST00000375740 SPARCL1Q14515 664 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 MTFR1Q15390 333 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 SLC1A5Q15758 541 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 PARP6Q2NL67 630 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 KIAA0319Q5VV43 1072 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 RFWD3Q6PCD5 774 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 STRADAQ7RTN6 431 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 FAM131BQ86XD5 332 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 CCNJLQ8IV13 435 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 CDKL3Q8IVW4 592 aaPredicted RBP14.44□□□□□ -0.1
MSH5-202ENST00000375740 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.44□□□□□ -0.1
MSH5-202ENST00000375740 SOCS4Q8WXH5 440 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 ANKRD27Q96NW4 1050 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 PPP1R12CQ9BZL4 782 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 UBE2OQ9C0C9 1292 aaKnown RBP14.44□□□□□ -0.1
MSH5-202ENST00000375740 TSPYL2Q9H2G4 693 aaPredicted RBP14.44□□□□□ -0.1
MSH5-202ENST00000375740 SLCO1B3Q9NPD5 702 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 GRID1Q9ULK0 1009 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 ST3GAL5Q9UNP4 418 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 DUSP11O75319 330 aaKnown RBP14.44□□□□□ -0.1
MSH5-202ENST00000375740 ACADSP16219 412 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 ZFXP17010 805 aaPredicted RBP14.44□□□□□ -0.1
MSH5-202ENST00000375740 SULT1E1P49888 294 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 PITX1P78337 314 aaPredicted RBP14.44□□□□□ -0.1
MSH5-202ENST00000375740 SLC25A52Q3SY17 297 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 KHDC1Q4VXA5 237 aaKnown RBP14.44□□□□□ -0.1
MSH5-202ENST00000375740 DCAF6Q58WW2 860 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 CXCL17Q6UXB2 119 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 GSTCDQ8NEC7 633 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 MZB1Q8WU39 189 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 CYTH2Q99418 400 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 MED10Q9BTT4 135 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 PITPNM3Q9BZ71 974 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 KLC2Q9H0B6 622 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 MIOSQ9NXC5 875 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 MFHAS1Q9Y4C4 1052 aa14.44□□□□□ -0.1
MSH5-202ENST00000375740 TCRBV9S1A1TA0A576 114 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 M0QZ92 97 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 GABRDO14764 452 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 METTL18O95568 372 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 APRTP07741 180 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 GOT1P17174 413 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 YWHAZP63104 245 aaKnown RBP14.43□□□□□ -0.1
MSH5-202ENST00000375740 MRPS5P82675 430 aaKnown RBP14.43□□□□□ -0.1
MSH5-202ENST00000375740 MUM1Q2TAK8 710 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 SLC45A4Q5BKX6 768 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 MDH1BQ5I0G3 518 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 KCNT2Q6UVM3 1135 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 CAND1Q86VP6 1230 aaKnown RBP14.43□□□□□ -0.1
MSH5-202ENST00000375740 NRG4Q8WWG1 115 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 WNT8BQ93098 351 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 GAD1Q99259 594 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 FZD10Q9ULW2 581 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 TRPV2Q9Y5S1 764 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 NPR3P17342 541 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 MLH1P40692 756 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 NR2C2P49116 596 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 RABGGTBP53611 331 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 DNAJC3Q13217 504 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 NCBP2-AS2Q69YL0 99 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 GDF6Q6KF10 455 aaPredicted RBP14.43□□□□□ -0.1
MSH5-202ENST00000375740 ENDOVQ8N8Q3 282 aaKnown RBP14.43□□□□□ -0.1
MSH5-202ENST00000375740 LPPQ93052 612 aa14.43□□□□□ -0.1
MSH5-202ENST00000375740 CFAP36Q96G28 342 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms