RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 TAF12Q16514 161 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PKDCCQ504Y2 493 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TMEM196Q5HYL7 178 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 MDH1BQ5I0G3 518 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PLEKHA7Q6IQ23 1121 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SLFN11Q7Z7L1 901 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PHLDB2Q86SQ0 1253 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TMEM150AQ86TG1 271 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 CMTM8Q8IZV2 173 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 LRRC57Q8N9N7 239 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 MYCBPAPQ8TBZ2 947 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ZNF564Q8TBZ8 553 aaPredicted RBP11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SLC2A14Q8TDB8 520 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SLC35F5Q8WV83 523 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 USP13Q92995 863 aaPredicted RBP11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 LOXL4Q96JB6 756 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 FAM83CQ9BQN1 747 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 MED10Q9BTT4 135 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SYNCQ9H7C4 482 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 OSGEPQ9NPF4 335 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ABI2Q9NYB9 513 aaPredicted RBP11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 WDR35Q9P2L0 1181 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 HSFX1Q9UBD0 423 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 CYTH4Q9UIA0 394 aa11.44□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ZFYVE26Q68DK2 2539 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 FRYQ5TBA9 3013 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ENC1O14682 589 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 FANCGO15287 622 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ATMINO43313 823 aaPredicted RBP11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 BUB1BO60566 1050 aaPredicted RBP11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ATP1A1P05023 1023 aaKnown RBP11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 HAPLN1P10915 354 aaPredicted RBP11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PRLRP16471 622 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 AVPR1AP37288 418 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TUFMP49411 452 aaKnown RBP11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 BCAT1P54687 386 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TSPY1Q01534 308 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 BST2Q10589 180 aaKnown RBP11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PDCLQ13371 301 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 MAMLD1Q13495 774 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 RUNX3Q13761 415 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 MAPRE1Q15691 268 aaKnown RBP11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 C2CD6Q53TS8 623 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PLA2G2CQ5R387 149 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 MEI1Q5TIA1 1274 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PAPD7Q5XG87 772 aaKnown RBP11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 FAM171BQ6P995 826 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 DAAM2Q86T65 1068 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 LRRTM3Q86VH5 581 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TTC30AQ86WT1 665 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 MAB21L3Q8N8X9 362 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TTC16Q8NEE8 873 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 IPO4Q8TEX9 1081 aaKnown RBP11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 CPXM1Q96SM3 734 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 DUSP16Q9BY84 665 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 B3GNT5Q9BYG0 378 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 FBRSL1Q9HCM7 1045 aaKnown RBP11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ABCB6Q9NP58 842 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 CRTAC1Q9NQ79 661 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 CYLDQ9NQC7 956 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ST7Q9NRC1 585 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 CHORDC1Q9UHD1 332 aaPredicted RBP11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 LCMT1Q9UIC8 334 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 AMFRQ9UKV5 643 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 NUP205Q92621 2012 aa11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 HELZP42694 1942 aaKnown RBP11.43□□□□□ -0.58
HLA-DQA1-202ENST00000374949 CCDC163A0A0D9SF12 145 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SIGLEC16A6NMB1 481 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 MYO1FO00160 1098 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TRDMT1O14717 391 aaKnown RBP11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 DCLK1O15075 740 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ATG13O75143 517 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 KCNK5O95279 499 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 FTCDO95954 541 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 HMGA1P17096 107 aaKnown RBP11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 ACADSBP45954 432 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 GSCP56915 257 aaPredicted RBP11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SHC2P98077 582 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PDE4CQ08493 712 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 MESDQ14696 234 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 RPS6KA1Q15418 735 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PLK5Q496M5 336 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PTPN20Q4JDL3 420 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 INTS6LQ5JSJ4 861 aaKnown RBP11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SDHAF4Q5VUM1 108 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 RNF43Q68DV7 783 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TXNDC8Q6A555 127 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PSAPL1Q6NUJ1 521 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 C11orf63Q6NUN7 778 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PMF1Q6P1K2 205 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 DNAJC24Q6P3W2 148 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PAQR9Q6ZVX9 377 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 PEX26Q7Z412 305 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 TMEM110Q86TL2 294 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 DCP1BQ8IZD4 617 aaKnown RBP11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 FUKQ8N0W3 1084 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 RPLP0P6Q8NHW5 317 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 SPPL2BQ8TCT7 592 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 HSFY1Q96LI6 401 aa11.42□□□□□ -0.58
HLA-DQA1-202ENST00000374949 EDEM2Q9BV94 578 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms