RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 MAP3K7CLP57077 242 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 ZBTB49Q6ZSB9 765 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 PHACTR1Q9C0D0 580 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 ESRRBO95718 433 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 CDH17Q12864 832 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 DCAF12L1Q5VU92 463 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 GPRC5AQ8NFJ5 357 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 GTF3C2Q8WUA4 911 aaPredicted RBP17.86■□□□□ 0.45
PTPRU-202ENST00000373779 CDRT15Q96T59 188 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 TRIM54Q9BYV2 358 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 KDM1AO60341 852 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 PLA2G6O60733 806 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 MBOAT7Q96N66 472 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 C17orf80Q9BSJ5 609 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 SLC12A4Q9UP95 1085 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 ANKRD6Q9Y2G4 727 aa17.86■□□□□ 0.45
PTPRU-202ENST00000373779 DEAF1O75398 565 aaPredicted RBP17.85■□□□□ 0.45
PTPRU-202ENST00000373779 INSRRP14616 1297 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 TPH1P17752 444 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 ME2P23368 584 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 MMP14P50281 582 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 CNTN2Q02246 1040 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 TIGD7Q6NT04 549 aaPredicted RBP17.85■□□□□ 0.45
PTPRU-202ENST00000373779 FAM183BPQ6ZVS7 135 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 ADCK1Q86TW2 530 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 RIN3Q8TB24 985 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 LRRC15Q8TF66 581 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 FAM162AQ96A26 154 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 TMEM79Q9BSE2 394 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 NMRAL1Q9HBL8 299 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 NMRK1Q9NWW6 199 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 SCHIP1Q9P0W5 487 aaPredicted RBP17.85■□□□□ 0.45
PTPRU-202ENST00000373779 AHCYL1O43865 530 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 MMP8P22894 467 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 TKTL1P51854 596 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 SNRNP27Q8WVK2 155 aaKnown RBP17.85■□□□□ 0.45
PTPRU-202ENST00000373779 SPOCK2Q92563 424 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 OLA1Q9NTK5 396 aaKnown RBP17.85■□□□□ 0.45
PTPRU-202ENST00000373779 SNTG2Q9NY99 539 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 LZTS1Q9Y250 596 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 H0Y626 953 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 TRIM16O95361 564 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 SERPINA6P08185 405 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 NPY2RP49146 381 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 NME5P56597 212 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 ST6GALNAC4Q9H4F1 302 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 RUBCNLQ9H714 662 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 NFKBIAP25963 317 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 MLH1P40692 756 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 ADIGQ0VDE8 80 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 CAPSQ13938 189 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 UBAP2LQ14157 1087 aaKnown RBP17.85■□□□□ 0.45
PTPRU-202ENST00000373779 GSTA3Q16772 222 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 PTF1AQ7RTS3 328 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 REPS2Q8NFH8 660 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 AKT1S1Q96B36 256 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 SPATC1LQ9H0A9 340 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 GPAMQ9HCL2 828 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 RNF181Q9P0P0 153 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 NR5A2O00482 541 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 BIRC5O15392 142 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 ASS1P00966 412 aaKnown RBP17.85■□□□□ 0.45
PTPRU-202ENST00000373779 ERVK-10P10266 1014 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 FUT11Q495W5 492 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 SPDYAQ5MJ70 313 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 RNF148Q8N7C7 305 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 GCNAQ96QF7 691 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 UNKQ9C0B0 810 aaKnown RBP17.85■□□□□ 0.45
PTPRU-202ENST00000373779 ZNF229Q9UJW7 825 aa17.85■□□□□ 0.45
PTPRU-202ENST00000373779 CLUHO75153 1309 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 SOAT2O75908 522 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 USP1O94782 785 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 MRNIPQ6NTE8 343 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 OPTNQ96CV9 577 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 ZNF333Q96JL9 665 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 PAIP2BQ9ULR5 123 aaKnown RBP17.84■□□□□ 0.45
PTPRU-202ENST00000373779 A0A0A0MRY4 1105 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 KCNK1O00180 336 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 UBA1P22314 1058 aaKnown RBP17.84■□□□□ 0.45
PTPRU-202ENST00000373779 IL31Q6EBC2 164 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 DHDDSQ86SQ9 333 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 ULK2Q8IYT8 1036 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 SPATA13Q96N96 652 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 COL1A1P02452 1464 aaPredicted RBP17.84■□□□□ 0.45
PTPRU-202ENST00000373779 CDH2P19022 906 aaPredicted RBP17.84■□□□□ 0.45
PTPRU-202ENST00000373779 NT5DC4Q86YG4 428 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 DEFB106AQ8N104 65 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 C2orf69Q8N8R5 385 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 ASIC4Q96FT7 647 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 SNRNP25Q9BV90 132 aaKnown RBP17.84■□□□□ 0.45
PTPRU-202ENST00000373779 CASS4Q9NQ75 786 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 MYO1DO94832 1006 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 CREB1P16220 341 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 YWHAZP63104 245 aaKnown RBP17.84■□□□□ 0.45
PTPRU-202ENST00000373779 WASHC5Q12768 1159 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 FASTKD3Q14CZ7 662 aaKnown RBP17.84■□□□□ 0.45
PTPRU-202ENST00000373779 ECSITQ9BQ95 431 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 MECRQ9BV79 373 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 SEPT3Q9UH03 358 aa17.84■□□□□ 0.45
PTPRU-202ENST00000373779 GSC2O15499 205 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms