RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 UBE2OQ9C0C9 1292 aaKnown RBP27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 OSBPL2Q9H1P3 480 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 ARHGEF4Q9NR80 690 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 GREB1Q4ZG55 1949 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 I6L893 689 aaPredicted RBP27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 LILRB3O75022 631 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 ZDHHC11BP0C7U3 371 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 CSH1P0DML2 217 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 CSH2P0DML3 217 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 SLC2A3P11169 496 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 AMPD1P23109 780 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 DARS2Q6PI48 645 aaKnown RBP27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 PDZD8Q8NEN9 1154 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 OVCA2Q8WZ82 227 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 HAPLN3Q96S86 360 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 EPAS1Q99814 870 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 VIPAS39Q9H9C1 493 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 PCDH9Q9HC56 1237 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 MTRF1LQ9UGC7 380 aaKnown RBP27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 OR12D3Q9UGF7 316 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 NUDT5Q9UKK9 219 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 MAGED2Q9UNF1 606 aaPredicted RBP27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 TLR6Q9Y2C9 796 aa27.23■■□□□ 1.95
ATPAF1-202ENST00000371937 ZNF638Q14966 1978 aaKnown RBP27.22■■□□□ 1.95
ATPAF1-202ENST00000371937 SASH3O75995 380 aa27.22■■□□□ 1.95
ATPAF1-202ENST00000371937 IVDP26440 423 aa27.22■■□□□ 1.95
ATPAF1-202ENST00000371937 CAV1Q03135 178 aa27.22■■□□□ 1.95
ATPAF1-202ENST00000371937 ART4Q93070 314 aa27.22■■□□□ 1.95
ATPAF1-202ENST00000371937 CDK5RAP1Q96SZ6 601 aaKnown RBP27.22■■□□□ 1.95
ATPAF1-202ENST00000371937 H7C0C1 242 aa27.21■■□□□ 1.95
ATPAF1-202ENST00000371937 PRRG1O14668 218 aa27.21■■□□□ 1.95
ATPAF1-202ENST00000371937 TEX28O15482 410 aa27.21■■□□□ 1.95
ATPAF1-202ENST00000371937 ATP5OP48047 213 aa27.21■■□□□ 1.95
ATPAF1-202ENST00000371937 TPI1P60174 286 aa27.21■■□□□ 1.95
ATPAF1-202ENST00000371937 XRCC4Q13426 336 aa27.21■■□□□ 1.95
ATPAF1-202ENST00000371937 DPYSQ14117 519 aa27.21■■□□□ 1.95
ATPAF1-202ENST00000371937 RASIP1Q5U651 963 aa27.21■■□□□ 1.95
ATPAF1-202ENST00000371937 NCBP2-AS2Q69YL0 99 aa27.21■■□□□ 1.95
ATPAF1-202ENST00000371937 ZDHHC24Q6UX98 284 aa27.21■■□□□ 1.95
ATPAF1-202ENST00000371937 ZC3H18Q86VM9 953 aaKnown RBP27.21■■□□□ 1.95
ATPAF1-202ENST00000371937 TCEAL8Q8IYN2 117 aa27.21■■□□□ 1.95
ATPAF1-202ENST00000371937 MREGQ8N565 214 aa27.21■■□□□ 1.95
ATPAF1-202ENST00000371937 FBXO25Q8TCJ0 367 aa27.21■■□□□ 1.95
ATPAF1-202ENST00000371937 LRRC45Q96CN5 670 aa27.21■■□□□ 1.95
ATPAF1-202ENST00000371937 YIPF1Q9Y548 306 aa27.21■■□□□ 1.95
ATPAF1-202ENST00000371937 CFAP69A5D8W1 941 aa27.2■■□□□ 1.95
ATPAF1-202ENST00000371937 MSI1O43347 362 aaKnown RBP27.2■■□□□ 1.95
ATPAF1-202ENST00000371937 IFNB1P01574 187 aa27.2■■□□□ 1.95
ATPAF1-202ENST00000371937 VEPH1Q14D04 833 aa27.2■■□□□ 1.95
ATPAF1-202ENST00000371937 RWDD3Q9Y3V2 267 aa27.2■■□□□ 1.95
ATPAF1-202ENST00000371937 FAM72CH0Y354 149 aa27.2■■□□□ 1.94
ATPAF1-202ENST00000371937 NDC80O14777 642 aa27.2■■□□□ 1.94
ATPAF1-202ENST00000371937 BMPR1AP36894 532 aa27.2■■□□□ 1.94
ATPAF1-202ENST00000371937 VPS41P49754 854 aa27.2■■□□□ 1.94
ATPAF1-202ENST00000371937 TAF12Q16514 161 aa27.2■■□□□ 1.94
ATPAF1-202ENST00000371937 FAM72AQ5TYM5 149 aa27.2■■□□□ 1.94
ATPAF1-202ENST00000371937 FAM72DQ6L9T8 149 aa27.2■■□□□ 1.94
ATPAF1-202ENST00000371937 TADA2BQ86TJ2 420 aa27.2■■□□□ 1.94
ATPAF1-202ENST00000371937 FAM72BQ86X60 149 aa27.2■■□□□ 1.94
ATPAF1-202ENST00000371937 ZNF276Q8N554 614 aa27.2■■□□□ 1.94
ATPAF1-202ENST00000371937 ACBD3Q9H3P7 528 aa27.2■■□□□ 1.94
ATPAF1-202ENST00000371937 LZTS1Q9Y250 596 aa27.2■■□□□ 1.94
ATPAF1-202ENST00000371937 CA8P35219 290 aa27.19■■□□□ 1.94
ATPAF1-202ENST00000371937 GBE1Q04446 702 aa27.19■■□□□ 1.94
ATPAF1-202ENST00000371937 EFEMP1Q12805 493 aa27.19■■□□□ 1.94
ATPAF1-202ENST00000371937 C10orf120Q5SQS8 335 aa27.19■■□□□ 1.94
ATPAF1-202ENST00000371937 PDZD4Q76G19 769 aaPredicted RBP27.19■■□□□ 1.94
ATPAF1-202ENST00000371937 TMC7Q7Z402 723 aa27.19■■□□□ 1.94
ATPAF1-202ENST00000371937 MYRFLQ96LU7 910 aa27.19■■□□□ 1.94
ATPAF1-202ENST00000371937 BCLAF3A2AJT9 711 aaKnown RBP27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 KCNU1A8MYU2 1149 aa27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 HTR7P34969 479 aa27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 TBX4P57082 545 aa27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 UNC45BQ8IWX7 931 aa27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 DPF3Q92784 378 aa27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 SLC39A13Q96H72 371 aa27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 ETNK2Q9NVF9 386 aa27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 MARCH2Q9P0N8 246 aa27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 ANAPC5Q9UJX4 755 aa27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 LCHNA4D1U4 455 aa27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 CXCL14O95715 111 aa27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 CTNNB1P35222 781 aa27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 HSPA9P38646 679 aaKnown RBP27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 GPS1Q13098 491 aa27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 PAFAH1B3Q15102 231 aaKnown RBP27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 P3H1Q32P28 736 aa27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 SNX30Q5VWJ9 437 aa27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 CDKL3Q8IVW4 592 aaPredicted RBP27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 FAM71DQ8N9W8 422 aa27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 GLIS1Q8NBF1 620 aa27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 TRMT2BQ96GJ1 504 aaKnown RBP27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 ZNF512Q96ME7 567 aaPredicted RBP27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 C10orf88Q9H8K7 445 aa27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 DTLQ9NZJ0 730 aa27.18■■□□□ 1.94
ATPAF1-202ENST00000371937 DCLK1O15075 740 aa27.17■■□□□ 1.94
ATPAF1-202ENST00000371937 TLR5O60602 858 aa27.17■■□□□ 1.94
ATPAF1-202ENST00000371937 PAGE1O75459 146 aa27.17■■□□□ 1.94
ATPAF1-202ENST00000371937 CNPP09543 421 aaKnown RBP27.17■■□□□ 1.94
ATPAF1-202ENST00000371937 HMGA1P17096 107 aaKnown RBP27.17■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms