RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 CRTAC1Q9NQ79 661 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 ARHGEF4Q9NR80 690 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 FAM105AQ9NUU6 356 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 GABRQQ9UN88 632 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 TEX264Q9Y6I9 313 aa12.14□□□□□ -0.47
PDE6C-201ENST00000371447 TYROBPO43914 113 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 THP07101 528 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 MATKP42679 507 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 TMPRSS15P98073 1019 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 NR1H3Q13133 447 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 CRHR2Q13324 411 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 TAF1BQ53T94 588 aaPredicted RBP12.13□□□□□ -0.47
PDE6C-201ENST00000371447 SLC45A4Q5BKX6 768 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 ADGRD1Q6QNK2 874 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 SLC26A9Q7LBE3 791 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 ZNF467Q7Z7K2 595 aaPredicted RBP12.13□□□□□ -0.47
PDE6C-201ENST00000371447 CDKL3Q8IVW4 592 aaPredicted RBP12.13□□□□□ -0.47
PDE6C-201ENST00000371447 DENND1AQ8TEH3 1009 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 AZIN2Q96A70 460 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 P2RY11Q96G91 374 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 SRPK1Q96SB4 655 aaKnown RBP12.13□□□□□ -0.47
PDE6C-201ENST00000371447 KCNA4P22459 653 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 CRYBB1P53674 252 aaPredicted RBP12.13□□□□□ -0.47
PDE6C-201ENST00000371447 PURAQ00577 322 aaKnown RBP12.13□□□□□ -0.47
PDE6C-201ENST00000371447 PDE1BQ01064 536 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 PLEKHG4Q58EX7 1191 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 FYB2Q5VWT5 728 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 PAQR9Q6ZVX9 377 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 UNC93AQ86WB7 457 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 ZNF354CQ86Y25 554 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 RELL1Q8IUW5 271 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 RIBC1Q8N443 379 aaPredicted RBP12.13□□□□□ -0.47
PDE6C-201ENST00000371447 CCDC134Q9H6E4 229 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 CHKBQ9Y259 395 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 FAM237BA0A1B0GVD1 139 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 CTGFP29279 349 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 EPHB2P29323 1055 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 MRPS5P82675 430 aaKnown RBP12.13□□□□□ -0.47
PDE6C-201ENST00000371447 TAZQ16635 292 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 PDK4Q16654 411 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 ALKAL1Q6UXT8 129 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 NT5DC4Q86YG4 428 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 KIRREL3Q8IZU9 778 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 NUP205Q92621 2012 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 MOCOSQ96EN8 888 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 TSSK1BQ9BXA7 367 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 DUSP16Q9BY84 665 aa12.13□□□□□ -0.47
PDE6C-201ENST00000371447 MBLAC1A4D2B0 266 aaPredicted RBP12.12□□□□□ -0.47
PDE6C-201ENST00000371447 ARL5CA6NH57 179 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 RASSF9O75901 435 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 ITGB1P05556 798 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 TGM2P21980 687 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 ALDH3A1P30838 453 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 RCN2Q14257 317 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 PPM1JQ5JR12 505 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 EFHC1Q5JVL4 640 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 ICE2Q659A1 982 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 TTC7BQ86TV6 843 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 TTC39CQ8N584 583 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 PNPLA1Q8N8W4 532 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 OR52K1Q8NGK4 314 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 PPP1R36Q96LQ0 422 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 ZNF670Q9BS34 389 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 ATXN3LQ9H3M9 355 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 POPDC2Q9HBU9 364 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 PRG3Q9Y2Y8 225 aaPredicted RBP12.12□□□□□ -0.47
PDE6C-201ENST00000371447 TTC3P53804 2025 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 DFFAO00273 331 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 MSI1O43347 362 aaKnown RBP12.12□□□□□ -0.47
PDE6C-201ENST00000371447 EDF1O60869 148 aaKnown RBP12.12□□□□□ -0.47
PDE6C-201ENST00000371447 KRT37O76014 449 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 ENDOD1O94919 500 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 ERCC2P18074 760 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 RGS2P41220 211 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 TPI1P60174 286 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 TIGD5Q53EQ6 642 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 NLRP9Q7RTR0 991 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 SLC26A11Q86WA9 606 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 CRYBG2Q8N1P7 616 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 ANKLE1Q8NAG6 615 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 TRPV1Q8NER1 839 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 RNF217Q8TC41 542 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 SHCBP1LQ9BZQ2 653 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 VPS11Q9H270 941 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 TRMT13Q9NUP7 481 aaKnown RBP12.12□□□□□ -0.47
PDE6C-201ENST00000371447 TXNDC16Q9P2K2 825 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 HEY2Q9UBP5 337 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 PSAT1Q9Y617 370 aa12.12□□□□□ -0.47
PDE6C-201ENST00000371447 DCAF8L1A6NGE4 600 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 FLT3LGP49771 235 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 CHI3L2Q15782 390 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 SLC25A52Q3SY17 297 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 MORN1Q5T089 497 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 SLC9A4Q6AI14 798 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 BANPQ8N9N5 519 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 SLC44A1Q8WWI5 657 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 SMOQ99835 787 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 PRDM16Q9HAZ2 1276 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 RXFP1Q9HBX9 757 aa12.11□□□□□ -0.47
PDE6C-201ENST00000371447 NOD2Q9HC29 1040 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms