RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 VCPP55072 806 aaKnown RBP24.74■■□□□ 1.55
SNX3-203ENST00000368979 ERVK-21P61565 698 aa24.74■■□□□ 1.55
SNX3-203ENST00000368979 NOMO1Q15155 1222 aa24.74■■□□□ 1.55
SNX3-203ENST00000368979 FAM72AQ5TYM5 149 aa24.74■■□□□ 1.55
SNX3-203ENST00000368979 FAM72DQ6L9T8 149 aa24.74■■□□□ 1.55
SNX3-203ENST00000368979 DNAJB7Q7Z6W7 309 aaPredicted RBP24.74■■□□□ 1.55
SNX3-203ENST00000368979 FAM72BQ86X60 149 aa24.74■■□□□ 1.55
SNX3-203ENST00000368979 CASKIN2Q8WXE0 1202 aa24.74■■□□□ 1.55
SNX3-203ENST00000368979 FCRL2Q96LA5 508 aaPredicted RBP24.74■■□□□ 1.55
SNX3-203ENST00000368979 ZNF512Q96ME7 567 aaPredicted RBP24.74■■□□□ 1.55
SNX3-203ENST00000368979 HAPLN3Q96S86 360 aa24.74■■□□□ 1.55
SNX3-203ENST00000368979 GDF15Q99988 308 aa24.74■■□□□ 1.55
SNX3-203ENST00000368979 OSBPL2Q9H1P3 480 aa24.74■■□□□ 1.55
SNX3-203ENST00000368979 CCSER2Q9H7U1 834 aa24.74■■□□□ 1.55
SNX3-203ENST00000368979 FEZ2Q9UHY8 353 aaPredicted RBP24.74■■□□□ 1.55
SNX3-203ENST00000368979 DRG1Q9Y295 367 aaKnown RBP24.74■■□□□ 1.55
SNX3-203ENST00000368979 UTP11Q9Y3A2 253 aaKnown RBP24.74■■□□□ 1.55
SNX3-203ENST00000368979 ESYT3A0FGR9 886 aa24.73■■□□□ 1.55
SNX3-203ENST00000368979 EEF2KO00418 725 aaKnown RBP24.73■■□□□ 1.55
SNX3-203ENST00000368979 TBX18O95935 607 aa24.73■■□□□ 1.55
SNX3-203ENST00000368979 ZFXP17010 805 aaPredicted RBP24.73■■□□□ 1.55
SNX3-203ENST00000368979 HCAR3P49019 387 aa24.73■■□□□ 1.55
SNX3-203ENST00000368979 CLCN6P51797 869 aa24.73■■□□□ 1.55
SNX3-203ENST00000368979 DPYSQ14117 519 aa24.73■■□□□ 1.55
SNX3-203ENST00000368979 TRIP4Q15650 581 aaPredicted RBP24.73■■□□□ 1.55
SNX3-203ENST00000368979 TAF12Q16514 161 aa24.73■■□□□ 1.55
SNX3-203ENST00000368979 KCTD19Q17RG1 926 aaPredicted RBP24.73■■□□□ 1.55
SNX3-203ENST00000368979 C10orf120Q5SQS8 335 aa24.73■■□□□ 1.55
SNX3-203ENST00000368979 NPNTQ6UXI9 565 aa24.73■■□□□ 1.55
SNX3-203ENST00000368979 CCNI2Q6ZMN8 369 aaPredicted RBP24.73■■□□□ 1.55
SNX3-203ENST00000368979 CCDC149Q6ZUS6 474 aa24.73■■□□□ 1.55
SNX3-203ENST00000368979 SYDE1Q6ZW31 735 aaPredicted RBP24.73■■□□□ 1.55
SNX3-203ENST00000368979 ITIH5Q86UX2 942 aa24.73■■□□□ 1.55
SNX3-203ENST00000368979 CCDC114Q96M63 670 aa24.73■■□□□ 1.55
SNX3-203ENST00000368979 ERP44Q9BS26 406 aa24.73■■□□□ 1.55
SNX3-203ENST00000368979 ARHGEF4Q9NR80 690 aa24.73■■□□□ 1.55
SNX3-203ENST00000368979 MARCH2Q9P0N8 246 aa24.73■■□□□ 1.55
SNX3-203ENST00000368979 UXTQ9UBK9 157 aaPredicted RBP24.73■■□□□ 1.55
SNX3-203ENST00000368979 NEU2Q9Y3R4 380 aa24.73■■□□□ 1.55
SNX3-203ENST00000368979 ASB3Q9Y575 518 aa24.73■■□□□ 1.55
SNX3-203ENST00000368979 CREB3O43889 395 aa24.72■■□□□ 1.55
SNX3-203ENST00000368979 CSPG5O95196 566 aa24.72■■□□□ 1.55
SNX3-203ENST00000368979 GLUD1P00367 558 aa24.72■■□□□ 1.55
SNX3-203ENST00000368979 MYBL2P10244 700 aa24.72■■□□□ 1.55
SNX3-203ENST00000368979 AMPD1P23109 780 aa24.72■■□□□ 1.55
SNX3-203ENST00000368979 IRS1P35568 1242 aa24.72■■□□□ 1.55
SNX3-203ENST00000368979 PPP3CCP48454 512 aa24.72■■□□□ 1.55
SNX3-203ENST00000368979 CLCN4P51793 760 aa24.72■■□□□ 1.55
SNX3-203ENST00000368979 TBX4P57082 545 aa24.72■■□□□ 1.55
SNX3-203ENST00000368979 DUPD1Q68J44 220 aa24.72■■□□□ 1.55
SNX3-203ENST00000368979 NCBP2-AS2Q69YL0 99 aa24.72■■□□□ 1.55
SNX3-203ENST00000368979 RFX8Q6ZV50 586 aa24.72■■□□□ 1.55
SNX3-203ENST00000368979 KREMEN2Q8NCW0 462 aa24.72■■□□□ 1.55
SNX3-203ENST00000368979 P3H4Q92791 437 aa24.72■■□□□ 1.55
SNX3-203ENST00000368979 TRPM5Q9NZQ8 1165 aa24.72■■□□□ 1.55
SNX3-203ENST00000368979 GAS8O95995 478 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 IGLV3-27P01718 113 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 ITGAVP06756 1048 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 C8AP07357 584 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 SLC2A3P11169 496 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 TUBP50607 506 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 LMNB2Q03252 620 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 TRADDQ15628 312 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 KLHDC10Q6PID8 442 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 TADA2BQ86TJ2 420 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 HNRNPLLQ8WVV9 542 aaKnown RBP24.71■■□□□ 1.55
SNX3-203ENST00000368979 OR12D3Q9UGF7 316 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 H3BNC9 293 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 LPXNO60711 386 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 PAGE1O75459 146 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 C1RP00736 705 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 PBX2P40425 430 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 PTK6Q13882 451 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 C1orf228Q6PIY5 440 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 ALLCQ8N6M5 410 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 EPAS1Q99814 870 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 ZNF334Q9HCZ1 680 aaPredicted RBP24.71■■□□□ 1.55
SNX3-203ENST00000368979 ETNK2Q9NVF9 386 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 ZNF148Q9UQR1 794 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 SNX10Q9Y5X0 201 aa24.71■■□□□ 1.55
SNX3-203ENST00000368979 MCF2LO15068 1137 aa24.7■■□□□ 1.54
SNX3-203ENST00000368979 ERLIN1O75477 346 aa24.7■■□□□ 1.54
SNX3-203ENST00000368979 LRG1P02750 347 aa24.7■■□□□ 1.54
SNX3-203ENST00000368979 CARSP49589 748 aaKnown RBP24.7■■□□□ 1.54
SNX3-203ENST00000368979 DRG2P55039 364 aaKnown RBP24.7■■□□□ 1.54
SNX3-203ENST00000368979 TPI1P60174 286 aa24.7■■□□□ 1.54
SNX3-203ENST00000368979 EIF3EP60228 445 aaKnown RBP24.7■■□□□ 1.54
SNX3-203ENST00000368979 RING1Q06587 406 aa24.7■■□□□ 1.54
SNX3-203ENST00000368979 CUL1Q13616 776 aa24.7■■□□□ 1.54
SNX3-203ENST00000368979 PPP1R7Q15435 360 aa24.7■■□□□ 1.54
SNX3-203ENST00000368979 HECTD3Q5T447 861 aa24.7■■□□□ 1.54
SNX3-203ENST00000368979 TMEM150AQ86TG1 271 aa24.7■■□□□ 1.54
SNX3-203ENST00000368979 MIB1Q86YT6 1006 aa24.7■■□□□ 1.54
SNX3-203ENST00000368979 GSPT2Q8IYD1 628 aaKnown RBP24.7■■□□□ 1.54
SNX3-203ENST00000368979 EIF1ADQ8N9N8 165 aaKnown RBP24.7■■□□□ 1.54
SNX3-203ENST00000368979 MICAL1Q8TDZ2 1067 aa24.7■■□□□ 1.54
SNX3-203ENST00000368979 PBX4Q9BYU1 374 aa24.7■■□□□ 1.54
SNX3-203ENST00000368979 IL21Q9HBE4 155 aa24.7■■□□□ 1.54
SNX3-203ENST00000368979 DNMT3LQ9UJW3 386 aa24.7■■□□□ 1.54
SNX3-203ENST00000368979 NEU3Q9UQ49 428 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms