RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 DACT2Q5SW24 774 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 FAXCQ5TGI0 409 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 RSBN1LQ6PCB5 846 aaPredicted RBP10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 PACS1Q6VY07 963 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 UNC5AQ6ZN44 842 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 TRIM67Q6ZTA4 783 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 PATL1Q86TB9 770 aaKnown RBP10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 CAND1Q86VP6 1230 aaKnown RBP10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 LDHDQ86WU2 507 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 MCPH1Q8NEM0 835 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 KLC2Q9H0B6 622 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 HOMER2Q9NSB8 354 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 ITGB1BP2Q9UKP3 347 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 GNEQ9Y223 722 aaKnown RBP10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 TMX2Q9Y320 296 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 KANSL1LA0AUZ9 987 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 SLC15A5A6NIM6 579 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 SLC22A2O15244 555 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 UGT1A9O60656 530 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 AVILO75366 819 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 RAD17O75943 681 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 ENDOD1O94919 500 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 PIGRP01833 764 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 ZFXP17010 805 aaPredicted RBP10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 PROZP22891 400 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 VARSP26640 1264 aaKnown RBP10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 LIG4P49917 911 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 NUP107P57740 925 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 NLRP11P59045 1033 aaKnown RBP10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 TUBA4AP68366 448 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 COG7P83436 770 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 TXNL4AP83876 142 aaKnown RBP10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 PCLAFQ15004 111 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 GPAT2Q6NUI2 795 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 POTEHQ6S545 545 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 CHERPQ8IWX8 916 aaKnown RBP10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 KCTD6Q8NC69 237 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 IL31RAQ8NI17 732 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 STON2Q8WXE9 905 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 SH2D3AQ9BRG2 576 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 UGT1A7Q9HAW7 530 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 UGT1A10Q9HAW8 530 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 UGT1A8Q9HAW9 530 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 RAB6BQ9NRW1 208 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 APPL1Q9UKG1 709 aa10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 AGO2Q9UKV8 859 aaKnown RBP10.83□□□□□ -0.68
LYSMD1-201ENST00000368908 IQCA1LA6NCM1 817 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 H3BSA7 217 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 LDHAP00338 332 aaKnown RBP10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 KRT3P12035 628 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 PORP16435 677 aaPredicted RBP10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 RFC1P35251 1148 aaPredicted RBP10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 AP3M2P53677 418 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 ABCE1P61221 599 aaKnown RBP10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 RPL10AP62906 217 aaKnown RBP10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 NAB1Q13506 487 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 MTMR1Q13613 665 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 DPYSQ14117 519 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 LRRC8BQ6P9F7 803 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 IYDQ6PHW0 289 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 WDTC1Q8N5D0 677 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 SLC4A11Q8NBS3 891 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 PRPF31Q8WWY3 499 aaKnown RBP10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 VPS50Q96JG6 964 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 TRIM56Q9BRZ2 755 aaKnown RBP10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 GCOM2Q9BZD3 368 aaPredicted RBP10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 OSBPL6Q9BZF3 934 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 IMPG2Q9BZV3 1241 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 PDLIM7Q9NR12 457 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 TUBGCP4Q9UGJ1 667 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 DCDC2Q9UHG0 476 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 HERC5Q9UII4 1024 aaKnown RBP10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 PCDHGB4Q9UN71 923 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 FAF1Q9UNN5 650 aaPredicted RBP10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 PCDHGB5Q9Y5G0 923 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 PCDHA11Q9Y5I1 949 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 ZNF701M0R085 212 aaPredicted RBP10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 THRAP10827 490 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 PSMC3P17980 439 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 MAGEA10P43363 369 aaPredicted RBP10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 KCNT1Q5JUK3 1230 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 N4BP2L1Q5TBK1 243 aaPredicted RBP10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 MROH9Q5TGP6 573 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 STEAP4Q687X5 459 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 SLFN12LQ6IEE8 588 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 BNC2Q6ZN30 1099 aaPredicted RBP10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 SETD3Q86TU7 594 aaPredicted RBP10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 PHTF2Q8N3S3 785 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 ZNF513Q8N8E2 541 aaPredicted RBP10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 TSPAN14Q8NG11 270 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 DEPDC1BQ8WUY9 529 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 KBTBD7Q8WVZ9 684 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 NLRP7Q8WX94 980 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 SLC7A3Q8WY07 619 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 ATP2A3Q93084 1043 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 CNDP1Q96KN2 507 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 GMLQ99445 158 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 EBNA1BP2Q99848 306 aaKnown RBP10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 PNPOQ9NVS9 261 aa10.82□□□□□ -0.68
LYSMD1-201ENST00000368908 RBAKQ9NYW8 714 aaPredicted RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms