RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 PITX1P78337 314 aaPredicted RBP19.72■□□□□ 0.75
CKS1B-203ENST00000368439 PTPN20Q4JDL3 420 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 MPPE1Q53F39 396 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 NADSYN1Q6IA69 706 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 ANO7Q6IWH7 933 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 CEP68Q76N32 757 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 CACNA2D4Q7Z3S7 1137 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 TRMT11Q7Z4G4 463 aaKnown RBP19.72■□□□□ 0.75
CKS1B-203ENST00000368439 KBTBD6Q86V97 674 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 UNC45BQ8IWX7 931 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 OLIG1Q8TAK6 271 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 ADAM32Q8TC27 787 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 DDI1Q8WTU0 396 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 ZC3H10Q96K80 434 aaKnown RBP19.72■□□□□ 0.75
CKS1B-203ENST00000368439 SERPINB11Q96P15 392 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 SLC2A13Q96QE2 648 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 SLC2A11Q9BYW1 496 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 TPSD1Q9BZJ3 242 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 ASNSD1Q9NWL6 643 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 GMEB2Q9UKD1 530 aa19.72■□□□□ 0.75
CKS1B-203ENST00000368439 A0A1W2PQF6 199 aa19.71■□□□□ 0.75
CKS1B-203ENST00000368439 DCLK1O15075 740 aa19.71■□□□□ 0.75
CKS1B-203ENST00000368439 ACSL4O60488 711 aa19.71■□□□□ 0.75
CKS1B-203ENST00000368439 NTSR1P30989 418 aa19.71■□□□□ 0.75
CKS1B-203ENST00000368439 JAM2P57087 298 aa19.71■□□□□ 0.75
CKS1B-203ENST00000368439 ZNF445P59923 1031 aa19.71■□□□□ 0.75
CKS1B-203ENST00000368439 PIK3R6Q5UE93 754 aa19.71■□□□□ 0.75
CKS1B-203ENST00000368439 OLFML1Q6UWY5 402 aa19.71■□□□□ 0.75
CKS1B-203ENST00000368439 FAM183BPQ6ZVS7 135 aa19.71■□□□□ 0.75
CKS1B-203ENST00000368439 NOP9Q86U38 636 aaKnown RBP19.71■□□□□ 0.75
CKS1B-203ENST00000368439 GABRG3Q99928 467 aa19.71■□□□□ 0.75
CKS1B-203ENST00000368439 TRIM62Q9BVG3 475 aa19.71■□□□□ 0.75
CKS1B-203ENST00000368439 IRX2Q9BZI1 471 aaPredicted RBP19.71■□□□□ 0.75
CKS1B-203ENST00000368439 POLMQ9NP87 494 aaPredicted RBP19.71■□□□□ 0.75
CKS1B-203ENST00000368439 MUC22E2RYF6 1773 aaPredicted RBP19.7■□□□□ 0.74
CKS1B-203ENST00000368439 LGALS16A8MUM7 142 aa19.7■□□□□ 0.74
CKS1B-203ENST00000368439 IRAK2O43187 625 aa19.7■□□□□ 0.74
CKS1B-203ENST00000368439 TRUB2O95900 331 aaKnown RBP19.7■□□□□ 0.74
CKS1B-203ENST00000368439 GLI1P08151 1106 aa19.7■□□□□ 0.74
CKS1B-203ENST00000368439 WASP42768 502 aa19.7■□□□□ 0.74
CKS1B-203ENST00000368439 PLK5Q496M5 336 aa19.7■□□□□ 0.74
CKS1B-203ENST00000368439 ANO6Q4KMQ2 910 aa19.7■□□□□ 0.74
CKS1B-203ENST00000368439 FKBP15Q5T1M5 1219 aa19.7■□□□□ 0.74
CKS1B-203ENST00000368439 TMEM215Q68D42 235 aa19.7■□□□□ 0.74
CKS1B-203ENST00000368439 CAVIN1Q6NZI2 390 aaKnown RBP19.7■□□□□ 0.74
CKS1B-203ENST00000368439 RFWD3Q6PCD5 774 aa19.7■□□□□ 0.74
CKS1B-203ENST00000368439 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.7■□□□□ 0.74
CKS1B-203ENST00000368439 DEFB106AQ8N104 65 aa19.7■□□□□ 0.74
CKS1B-203ENST00000368439 TMA16Q96EY4 203 aaKnown RBP19.7■□□□□ 0.74
CKS1B-203ENST00000368439 MYEOVQ96EZ4 313 aa19.7■□□□□ 0.74
CKS1B-203ENST00000368439 DUSP15Q9H1R2 295 aaPredicted RBP19.7■□□□□ 0.74
CKS1B-203ENST00000368439 FAM207AQ9NSI2 230 aaPredicted RBP19.7■□□□□ 0.74
CKS1B-203ENST00000368439 THADAQ6YHU6 1953 aa19.7■□□□□ 0.74
CKS1B-203ENST00000368439 CKAP5Q14008 2032 aa19.69■□□□□ 0.74
CKS1B-203ENST00000368439 CEP250Q9BV73 2442 aa19.69■□□□□ 0.74
CKS1B-203ENST00000368439 TCRBV21S2A2A0A5A6 115 aa19.69■□□□□ 0.74
CKS1B-203ENST00000368439 CAPN9O14815 690 aa19.69■□□□□ 0.74
CKS1B-203ENST00000368439 TPM2P07951 284 aa19.69■□□□□ 0.74
CKS1B-203ENST00000368439 HOXB2P14652 356 aa19.69■□□□□ 0.74
CKS1B-203ENST00000368439 SLC11A2P49281 568 aa19.69■□□□□ 0.74
CKS1B-203ENST00000368439 POLR2FP61218 127 aaKnown RBP19.69■□□□□ 0.74
CKS1B-203ENST00000368439 ENPP2Q13822 863 aa19.69■□□□□ 0.74
CKS1B-203ENST00000368439 EFHC1Q5JVL4 640 aa19.69■□□□□ 0.74
CKS1B-203ENST00000368439 MPP7Q5T2T1 576 aa19.69■□□□□ 0.74
CKS1B-203ENST00000368439 KIAA1211LQ6NV74 962 aa19.69■□□□□ 0.74
CKS1B-203ENST00000368439 ANKS1BQ7Z6G8 1248 aa19.69■□□□□ 0.74
CKS1B-203ENST00000368439 KIAA0907Q7Z7F0 614 aaPredicted RBP19.69■□□□□ 0.74
CKS1B-203ENST00000368439 CHPFQ8IZ52 775 aa19.69■□□□□ 0.74
CKS1B-203ENST00000368439 AOPEPQ8N6M6 819 aa19.69■□□□□ 0.74
CKS1B-203ENST00000368439 EPS8L1Q8TE68 723 aa19.69■□□□□ 0.74
CKS1B-203ENST00000368439 LOXL4Q96JB6 756 aa19.69■□□□□ 0.74
CKS1B-203ENST00000368439 PRICKLE1Q96MT3 831 aaPredicted RBP19.69■□□□□ 0.74
CKS1B-203ENST00000368439 NOX5Q96PH1 765 aa19.69■□□□□ 0.74
CKS1B-203ENST00000368439 BPIFA3Q9BQP9 254 aa19.69■□□□□ 0.74
CKS1B-203ENST00000368439 FUCA2Q9BTY2 467 aa19.69■□□□□ 0.74
CKS1B-203ENST00000368439 THAP10Q9P2Z0 257 aaPredicted RBP19.69■□□□□ 0.74
CKS1B-203ENST00000368439 XPO7Q9UIA9 1087 aaKnown RBP19.69■□□□□ 0.74
CKS1B-203ENST00000368439 NOCTQ9UK39 431 aaKnown RBP19.69■□□□□ 0.74
CKS1B-203ENST00000368439 NUP205Q92621 2012 aa19.68■□□□□ 0.74
CKS1B-203ENST00000368439 TNRC6BQ9UPQ9 1833 aaKnown RBP19.68■□□□□ 0.74
CKS1B-203ENST00000368439 WASH3PC4AMC7 463 aa19.68■□□□□ 0.74
CKS1B-203ENST00000368439 HSF2BPO75031 334 aa19.68■□□□□ 0.74
CKS1B-203ENST00000368439 ALDH1A2O94788 518 aa19.68■□□□□ 0.74
CKS1B-203ENST00000368439 EPN2O95208 641 aa19.68■□□□□ 0.74
CKS1B-203ENST00000368439 ATP1A3P13637 1013 aa19.68■□□□□ 0.74
CKS1B-203ENST00000368439 HLA-FP30511 346 aa19.68■□□□□ 0.74
CKS1B-203ENST00000368439 GABRB2P47870 512 aa19.68■□□□□ 0.74
CKS1B-203ENST00000368439 SLC6A3Q01959 620 aa19.68■□□□□ 0.74
CKS1B-203ENST00000368439 SPEM2Q0P670 501 aa19.68■□□□□ 0.74
CKS1B-203ENST00000368439 SYCP1Q15431 976 aa19.68■□□□□ 0.74
CKS1B-203ENST00000368439 DCAF6Q58WW2 860 aa19.68■□□□□ 0.74
CKS1B-203ENST00000368439 TAF3Q5VWG9 929 aa19.68■□□□□ 0.74
CKS1B-203ENST00000368439 OR6B2Q6IFH4 312 aa19.68■□□□□ 0.74
CKS1B-203ENST00000368439 SLC26A9Q7LBE3 791 aa19.68■□□□□ 0.74
CKS1B-203ENST00000368439 DHX40Q8IX18 779 aaKnown RBP19.68■□□□□ 0.74
CKS1B-203ENST00000368439 GPR161Q8N6U8 529 aaKnown RBP19.68■□□□□ 0.74
CKS1B-203ENST00000368439 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.68■□□□□ 0.74
CKS1B-203ENST00000368439 TMEM35BQ8NCS4 154 aa19.68■□□□□ 0.74
CKS1B-203ENST00000368439 ZNF397Q8NF99 534 aaPredicted RBP19.68■□□□□ 0.74
CKS1B-203ENST00000368439 WFDC5Q8TCV5 224 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms