RNA–Protein interactions for RNA: ENST00000368046.7

CD48-202, Transcript of CD48 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD48, Length 1,126 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-202ENST00000368046 NNTQ13423 1086 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 TAF5Q15542 800 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 HSF5Q4G112 596 aaPredicted RBP10.26□□□□□ -0.77
CD48-202ENST00000368046 NUGGCQ68CJ6 796 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 GRAMD4Q6IC98 578 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 NOP9Q86U38 636 aaKnown RBP10.26□□□□□ -0.77
CD48-202ENST00000368046 LONP2Q86WA8 852 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 ERICH1Q86X53 443 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 DEFB106AQ8N104 65 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 C1orf131Q8NDD1 294 aaKnown RBP10.26□□□□□ -0.77
CD48-202ENST00000368046 DDI1Q8WTU0 396 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 ACDQ96AP0 544 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 C18orf8Q96DM3 657 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 SLC39A13Q96H72 371 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 NAP1L5Q96NT1 182 aaPredicted RBP10.26□□□□□ -0.77
CD48-202ENST00000368046 SYNCQ9H7C4 482 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 DNAJC17Q9NVM6 304 aaKnown RBP10.26□□□□□ -0.77
CD48-202ENST00000368046 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.26□□□□□ -0.77
CD48-202ENST00000368046 PLK2Q9NYY3 685 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 TJP2Q9UDY2 1190 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 TLR6Q9Y2C9 796 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 SLC27A6Q9Y2P4 619 aa10.26□□□□□ -0.77
CD48-202ENST00000368046 KIF26AQ9ULI4 1882 aaPredicted RBP10.25□□□□□ -0.77
CD48-202ENST00000368046 A0A1W2PQC6 194 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 ANTXRLA6NF34 631 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 TRIM24O15164 1050 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 IRAK2O43187 625 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 MSI1O43347 362 aaKnown RBP10.25□□□□□ -0.77
CD48-202ENST00000368046 TSPAN3O60637 253 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 HSF2BPO75031 334 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 LSM8O95777 96 aaKnown RBP10.25□□□□□ -0.77
CD48-202ENST00000368046 TRUB2O95900 331 aaKnown RBP10.25□□□□□ -0.77
CD48-202ENST00000368046 MMEP08473 750 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 CCDC172P0C7W6 258 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 GBP1P32455 592 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 NOS2P35228 1153 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 FNTBP49356 437 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 SEC13P55735 322 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 TPM4P67936 248 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 CDK17Q00537 523 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 CDR2Q01850 454 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 KDSRQ06136 332 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 EIF4EBP2Q13542 120 aaPredicted RBP10.25□□□□□ -0.77
CD48-202ENST00000368046 DMC1Q14565 340 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 NR1I3Q14994 352 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 ZSCAN23Q3MJ62 389 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 PTPN20Q4JDL3 420 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 DCAF6Q58WW2 860 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 TAF3Q5VWG9 929 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 TOGARAM2Q6ZUX3 1019 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 SLC26A9Q7LBE3 791 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 ASCL5Q7RTU5 278 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 CACNA2D4Q7Z3S7 1137 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 SFTPA1Q8IWL2 248 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 TERB1Q8NA31 727 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 IL17RCQ8NAC3 791 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 ZNF397Q8NF99 534 aaPredicted RBP10.25□□□□□ -0.77
CD48-202ENST00000368046 EPS8L1Q8TE68 723 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 IPO4Q8TEX9 1081 aaKnown RBP10.25□□□□□ -0.77
CD48-202ENST00000368046 BHMTQ93088 406 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 DDX50Q9BQ39 737 aaKnown RBP10.25□□□□□ -0.77
CD48-202ENST00000368046 CBX8Q9HC52 389 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 SLC12A6Q9UHW9 1150 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 NOCTQ9UK39 431 aaKnown RBP10.25□□□□□ -0.77
CD48-202ENST00000368046 MMP17Q9ULZ9 603 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 MYH10P35580 1976 aa10.25□□□□□ -0.77
CD48-202ENST00000368046 PATJQ8NI35 1801 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 A0A1B0GTH6 734 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 GOLGA6L7A0A1B0GV03 622 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 PRR23AA6NEV1 266 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 PRRT4C9JH25 899 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 GFRA2O00451 464 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 TIMM44O43615 452 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 GFRA3O60609 400 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 SERPINC1P01008 464 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 IGLV3-25P01717 112 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 ERBB2P04626 1255 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 CYP1A1P04798 512 aaPredicted RBP10.24□□□□□ -0.77
CD48-202ENST00000368046 SLC2A3P11169 496 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 CHRNB2P17787 502 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 SCNN1AP37088 669 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 CAMK2BQ13554 666 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 CRY1Q16526 586 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 ZC3H12AQ5D1E8 599 aaKnown RBP10.24□□□□□ -0.77
CD48-202ENST00000368046 EOGTQ5NDL2 527 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 C10orf76Q5T2E6 689 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 MPP7Q5T2T1 576 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 PIK3R6Q5UE93 754 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 HEATR6Q6AI08 1181 aaKnown RBP10.24□□□□□ -0.77
CD48-202ENST00000368046 SDE2Q6IQ49 451 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 OLFML1Q6UWY5 402 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 FAM183BPQ6ZVS7 135 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 TRMT11Q7Z4G4 463 aaKnown RBP10.24□□□□□ -0.77
CD48-202ENST00000368046 WDR5BQ86VZ2 330 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 CCDC33Q8N5R6 958 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 ALLCQ8N6M5 410 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 SUMF1Q8NBK3 374 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 TXNDC5Q8NBS9 432 aaKnown RBP10.24□□□□□ -0.77
CD48-202ENST00000368046 MSANTD4Q8NCY6 345 aa10.24□□□□□ -0.77
CD48-202ENST00000368046 ADAM32Q8TC27 787 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms